Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SPTSSBQ8NFR3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SPTSSBQ8NFR3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SPTSSBQ8NFR3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SPTSSBQ8NFR3 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SPTSSBQ8NFR3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC11.75□□□□□ -0.53
SPTSSBQ8NFR3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SPTSSBQ8NFR3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SPTSSBQ8NFR3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SPTSSBQ8NFR3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SPTSSBQ8NFR3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
SPTSSBQ8NFR3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SPTSSBQ8NFR3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC11.74□□□□□ -0.53
SPTSSBQ8NFR3 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SPTSSBQ8NFR3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SPTSSBQ8NFR3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SPTSSBQ8NFR3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SPTSSBQ8NFR3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SPTSSBQ8NFR3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SPTSSBQ8NFR3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SPTSSBQ8NFR3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SPTSSBQ8NFR3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SPTSSBQ8NFR3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SPTSSBQ8NFR3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
SPTSSBQ8NFR3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SPTSSBQ8NFR3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SPTSSBQ8NFR3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SPTSSBQ8NFR3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC11.74□□□□□ -0.53
SPTSSBQ8NFR3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC11.74□□□□□ -0.53
SPTSSBQ8NFR3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SPTSSBQ8NFR3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC11.74□□□□□ -0.53
SPTSSBQ8NFR3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SPTSSBQ8NFR3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SPTSSBQ8NFR3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SPTSSBQ8NFR3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC11.73□□□□□ -0.53
SPTSSBQ8NFR3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SPTSSBQ8NFR3 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
SPTSSBQ8NFR3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SPTSSBQ8NFR3 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SPTSSBQ8NFR3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SPTSSBQ8NFR3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SPTSSBQ8NFR3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
SPTSSBQ8NFR3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SPTSSBQ8NFR3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SPTSSBQ8NFR3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SPTSSBQ8NFR3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SPTSSBQ8NFR3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC11.73□□□□□ -0.53
SPTSSBQ8NFR3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC11.73□□□□□ -0.53
SPTSSBQ8NFR3 GUSBP5-202ENST00000510805 1989 ntBASIC11.73□□□□□ -0.53
SPTSSBQ8NFR3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SPTSSBQ8NFR3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SPTSSBQ8NFR3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SPTSSBQ8NFR3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SPTSSBQ8NFR3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 AC004812.2-201ENST00000611079 2094 ntBASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SPTSSBQ8NFR3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
SPTSSBQ8NFR3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
SPTSSBQ8NFR3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SPTSSBQ8NFR3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SPTSSBQ8NFR3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
SPTSSBQ8NFR3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
SPTSSBQ8NFR3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SPTSSBQ8NFR3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
SPTSSBQ8NFR3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SPTSSBQ8NFR3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms