Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SRFBP1Q8NEF9 AC104564.3-201ENST00000582367 638 ntBASIC20.35■□□□□ 0.85
SRFBP1Q8NEF9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.35■□□□□ 0.85
SRFBP1Q8NEF9 AP006587.3-201ENST00000525742 1516 ntBASIC20.35■□□□□ 0.85
SRFBP1Q8NEF9 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.35■□□□□ 0.85
SRFBP1Q8NEF9 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRFBP1Q8NEF9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRFBP1Q8NEF9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRFBP1Q8NEF9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRFBP1Q8NEF9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRFBP1Q8NEF9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SRFBP1Q8NEF9 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRFBP1Q8NEF9 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRFBP1Q8NEF9 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.34■□□□□ 0.85
SRFBP1Q8NEF9 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRFBP1Q8NEF9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRFBP1Q8NEF9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRFBP1Q8NEF9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRFBP1Q8NEF9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRFBP1Q8NEF9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRFBP1Q8NEF9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.34■□□□□ 0.85
SRFBP1Q8NEF9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.34■□□□□ 0.85
SRFBP1Q8NEF9 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRFBP1Q8NEF9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRFBP1Q8NEF9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.34■□□□□ 0.85
SRFBP1Q8NEF9 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRFBP1Q8NEF9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRFBP1Q8NEF9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.34■□□□□ 0.85
SRFBP1Q8NEF9 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SRFBP1Q8NEF9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SRFBP1Q8NEF9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SRFBP1Q8NEF9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SRFBP1Q8NEF9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
SRFBP1Q8NEF9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SRFBP1Q8NEF9 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.33■□□□□ 0.85
SRFBP1Q8NEF9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.33■□□□□ 0.85
SRFBP1Q8NEF9 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
SRFBP1Q8NEF9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRFBP1Q8NEF9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
SRFBP1Q8NEF9 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.33■□□□□ 0.84
SRFBP1Q8NEF9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.33■□□□□ 0.84
SRFBP1Q8NEF9 AC005224.4-201ENST00000583262 1652 ntBASIC20.32■□□□□ 0.84
SRFBP1Q8NEF9 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRFBP1Q8NEF9 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SRFBP1Q8NEF9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.32■□□□□ 0.84
SRFBP1Q8NEF9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRFBP1Q8NEF9 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.32■□□□□ 0.84
SRFBP1Q8NEF9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SRFBP1Q8NEF9 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.32■□□□□ 0.84
SRFBP1Q8NEF9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SRFBP1Q8NEF9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.32■□□□□ 0.84
SRFBP1Q8NEF9 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SRFBP1Q8NEF9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SRFBP1Q8NEF9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRFBP1Q8NEF9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRFBP1Q8NEF9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRFBP1Q8NEF9 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SRFBP1Q8NEF9 LINC00565-201ENST00000562710 2331 ntBASIC20.31■□□□□ 0.84
SRFBP1Q8NEF9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.31■□□□□ 0.84
SRFBP1Q8NEF9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.31■□□□□ 0.84
SRFBP1Q8NEF9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
SRFBP1Q8NEF9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRFBP1Q8NEF9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRFBP1Q8NEF9 AC027612.3-201ENST00000413684 1047 ntBASIC20.31■□□□□ 0.84
SRFBP1Q8NEF9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SRFBP1Q8NEF9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.31■□□□□ 0.84
SRFBP1Q8NEF9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.31■□□□□ 0.84
SRFBP1Q8NEF9 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SRFBP1Q8NEF9 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SRFBP1Q8NEF9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SRFBP1Q8NEF9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRFBP1Q8NEF9 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRFBP1Q8NEF9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.3■□□□□ 0.84
SRFBP1Q8NEF9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SRFBP1Q8NEF9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SRFBP1Q8NEF9 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRFBP1Q8NEF9 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRFBP1Q8NEF9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRFBP1Q8NEF9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SRFBP1Q8NEF9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SRFBP1Q8NEF9 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SRFBP1Q8NEF9 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SRFBP1Q8NEF9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRFBP1Q8NEF9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRFBP1Q8NEF9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SRFBP1Q8NEF9 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SRFBP1Q8NEF9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SRFBP1Q8NEF9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRFBP1Q8NEF9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRFBP1Q8NEF9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRFBP1Q8NEF9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.29■□□□□ 0.84
SRFBP1Q8NEF9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.29■□□□□ 0.84
SRFBP1Q8NEF9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.29■□□□□ 0.84
SRFBP1Q8NEF9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.29■□□□□ 0.84
SRFBP1Q8NEF9 AC055733.4-201ENST00000638462 1354 ntBASIC20.29■□□□□ 0.84
SRFBP1Q8NEF9 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRFBP1Q8NEF9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SRFBP1Q8NEF9 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRFBP1Q8NEF9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
SRFBP1Q8NEF9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms