Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CROCCP3Q8IVE0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.32■□□□□ 0.68
CROCCP3Q8IVE0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CROCCP3Q8IVE0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CROCCP3Q8IVE0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CROCCP3Q8IVE0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CROCCP3Q8IVE0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.32■□□□□ 0.68
CROCCP3Q8IVE0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CROCCP3Q8IVE0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.31■□□□□ 0.68
CROCCP3Q8IVE0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.31■□□□□ 0.68
CROCCP3Q8IVE0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CROCCP3Q8IVE0 GABARAPL3-202ENST00000624044 1851 ntBASIC19.31■□□□□ 0.68
CROCCP3Q8IVE0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CROCCP3Q8IVE0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CROCCP3Q8IVE0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.31■□□□□ 0.68
CROCCP3Q8IVE0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CROCCP3Q8IVE0 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CROCCP3Q8IVE0 AC011551.1-201ENST00000614101 683 ntBASIC19.31■□□□□ 0.68
CROCCP3Q8IVE0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CROCCP3Q8IVE0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.31■□□□□ 0.68
CROCCP3Q8IVE0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CROCCP3Q8IVE0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
CROCCP3Q8IVE0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CROCCP3Q8IVE0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CROCCP3Q8IVE0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CROCCP3Q8IVE0 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CROCCP3Q8IVE0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CROCCP3Q8IVE0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CROCCP3Q8IVE0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CROCCP3Q8IVE0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CROCCP3Q8IVE0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CROCCP3Q8IVE0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.3■□□□□ 0.68
CROCCP3Q8IVE0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CROCCP3Q8IVE0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CROCCP3Q8IVE0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CROCCP3Q8IVE0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CROCCP3Q8IVE0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CROCCP3Q8IVE0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CROCCP3Q8IVE0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.29■□□□□ 0.68
CROCCP3Q8IVE0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CROCCP3Q8IVE0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CROCCP3Q8IVE0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CROCCP3Q8IVE0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CROCCP3Q8IVE0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CROCCP3Q8IVE0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.29■□□□□ 0.68
CROCCP3Q8IVE0 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
CROCCP3Q8IVE0 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.29■□□□□ 0.68
CROCCP3Q8IVE0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CROCCP3Q8IVE0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CROCCP3Q8IVE0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CROCCP3Q8IVE0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CROCCP3Q8IVE0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CROCCP3Q8IVE0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CROCCP3Q8IVE0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CROCCP3Q8IVE0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CROCCP3Q8IVE0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CROCCP3Q8IVE0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CROCCP3Q8IVE0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.28■□□□□ 0.68
CROCCP3Q8IVE0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CROCCP3Q8IVE0 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.28■□□□□ 0.68
CROCCP3Q8IVE0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CROCCP3Q8IVE0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CROCCP3Q8IVE0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CROCCP3Q8IVE0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CROCCP3Q8IVE0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.28■□□□□ 0.68
CROCCP3Q8IVE0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CROCCP3Q8IVE0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CROCCP3Q8IVE0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CROCCP3Q8IVE0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CROCCP3Q8IVE0 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CROCCP3Q8IVE0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CROCCP3Q8IVE0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CROCCP3Q8IVE0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.27■□□□□ 0.68
CROCCP3Q8IVE0 AC087393.1-201ENST00000582896 145 ntBASIC19.27■□□□□ 0.68
CROCCP3Q8IVE0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CROCCP3Q8IVE0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.27■□□□□ 0.68
CROCCP3Q8IVE0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CROCCP3Q8IVE0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CROCCP3Q8IVE0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CROCCP3Q8IVE0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CROCCP3Q8IVE0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CROCCP3Q8IVE0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CROCCP3Q8IVE0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CROCCP3Q8IVE0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CROCCP3Q8IVE0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.26■□□□□ 0.67
CROCCP3Q8IVE0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CROCCP3Q8IVE0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CROCCP3Q8IVE0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CROCCP3Q8IVE0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CROCCP3Q8IVE0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CROCCP3Q8IVE0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CROCCP3Q8IVE0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CROCCP3Q8IVE0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CROCCP3Q8IVE0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CROCCP3Q8IVE0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CROCCP3Q8IVE0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CROCCP3Q8IVE0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.25■□□□□ 0.67
CROCCP3Q8IVE0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.25■□□□□ 0.67
CROCCP3Q8IVE0 AC098818.2-201ENST00000564925 2320 ntBASIC19.25■□□□□ 0.67
CROCCP3Q8IVE0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms