Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RNF180Q86T96 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.4
RNF180Q86T96 LINC00526-201ENST00000581067 1875 ntBASIC23.83■■□□□ 1.4
RNF180Q86T96 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RNF180Q86T96 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RNF180Q86T96 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF180Q86T96 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.82■■□□□ 1.4
RNF180Q86T96 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.82■■□□□ 1.4
RNF180Q86T96 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF180Q86T96 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF180Q86T96 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF180Q86T96 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF180Q86T96 ESRRAP1-201ENST00000400596 1257 ntBASIC23.82■■□□□ 1.4
RNF180Q86T96 AC098590.1-201ENST00000468126 897 ntBASIC23.82■■□□□ 1.4
RNF180Q86T96 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.82■■□□□ 1.4
RNF180Q86T96 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.82■■□□□ 1.4
RNF180Q86T96 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC23.82■■□□□ 1.4
RNF180Q86T96 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.82■■□□□ 1.4
RNF180Q86T96 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.82■■□□□ 1.4
RNF180Q86T96 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.82■■□□□ 1.4
RNF180Q86T96 MYC-209ENST00000641252 345 ntBASIC23.82■■□□□ 1.4
RNF180Q86T96 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.82■■□□□ 1.4
RNF180Q86T96 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF180Q86T96 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
RNF180Q86T96 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RNF180Q86T96 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.81■■□□□ 1.4
RNF180Q86T96 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF180Q86T96 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF180Q86T96 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF180Q86T96 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF180Q86T96 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.81■■□□□ 1.4
RNF180Q86T96 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC23.81■■□□□ 1.4
RNF180Q86T96 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.81■■□□□ 1.4
RNF180Q86T96 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.81■■□□□ 1.4
RNF180Q86T96 ARL16-209ENST00000573715 763 ntTSL 3 BASIC23.81■■□□□ 1.4
RNF180Q86T96 ARL16-211ENST00000576135 694 ntTSL 3 BASIC23.81■■□□□ 1.4
RNF180Q86T96 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF180Q86T96 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF180Q86T96 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF180Q86T96 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF180Q86T96 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF180Q86T96 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RNF180Q86T96 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.81■■□□□ 1.4
RNF180Q86T96 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RNF180Q86T96 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
RNF180Q86T96 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF180Q86T96 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF180Q86T96 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF180Q86T96 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF180Q86T96 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.8■■□□□ 1.4
RNF180Q86T96 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF180Q86T96 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
RNF180Q86T96 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF180Q86T96 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
RNF180Q86T96 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
RNF180Q86T96 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.79■■□□□ 1.4
RNF180Q86T96 POU5F1P4-201ENST00000413175 1085 ntBASIC23.79■■□□□ 1.4
RNF180Q86T96 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RNF180Q86T96 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.79■■□□□ 1.4
RNF180Q86T96 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RNF180Q86T96 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.79■■□□□ 1.4
RNF180Q86T96 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF180Q86T96 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RNF180Q86T96 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.78■■□□□ 1.4
RNF180Q86T96 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF180Q86T96 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RNF180Q86T96 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF180Q86T96 GCSHP5-201ENST00000443090 522 ntBASIC23.78■■□□□ 1.4
RNF180Q86T96 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.78■■□□□ 1.4
RNF180Q86T96 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.78■■□□□ 1.4
RNF180Q86T96 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.78■■□□□ 1.4
RNF180Q86T96 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.78■■□□□ 1.4
RNF180Q86T96 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF180Q86T96 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF180Q86T96 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF180Q86T96 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RNF180Q86T96 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
RNF180Q86T96 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC23.77■■□□□ 1.4
RNF180Q86T96 AC091874.3-201ENST00000512672 1195 ntBASIC23.77■■□□□ 1.4
RNF180Q86T96 AL162412.1-201ENST00000567129 965 ntBASIC23.77■■□□□ 1.4
RNF180Q86T96 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF180Q86T96 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RNF180Q86T96 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF180Q86T96 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.76■■□□□ 1.39
RNF180Q86T96 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RNF180Q86T96 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.76■■□□□ 1.39
RNF180Q86T96 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.76■■□□□ 1.39
RNF180Q86T96 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC23.76■■□□□ 1.39
RNF180Q86T96 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC23.76■■□□□ 1.39
RNF180Q86T96 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.76■■□□□ 1.39
RNF180Q86T96 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RNF180Q86T96 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RNF180Q86T96 AL591742.1-201ENST00000604433 565 ntBASIC23.76■■□□□ 1.39
RNF180Q86T96 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
RNF180Q86T96 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF180Q86T96 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
RNF180Q86T96 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF180Q86T96 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF180Q86T96 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RNF180Q86T96 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms