Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COLCA1Q6ZS62 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COLCA1Q6ZS62 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
COLCA1Q6ZS62 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.42■□□□□ 0.54
COLCA1Q6ZS62 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COLCA1Q6ZS62 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COLCA1Q6ZS62 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
COLCA1Q6ZS62 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
COLCA1Q6ZS62 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.42■□□□□ 0.54
COLCA1Q6ZS62 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COLCA1Q6ZS62 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.42■□□□□ 0.54
COLCA1Q6ZS62 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
COLCA1Q6ZS62 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COLCA1Q6ZS62 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COLCA1Q6ZS62 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COLCA1Q6ZS62 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
COLCA1Q6ZS62 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
COLCA1Q6ZS62 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COLCA1Q6ZS62 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COLCA1Q6ZS62 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
COLCA1Q6ZS62 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.41■□□□□ 0.54
COLCA1Q6ZS62 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.41■□□□□ 0.54
COLCA1Q6ZS62 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
COLCA1Q6ZS62 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COLCA1Q6ZS62 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COLCA1Q6ZS62 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.41■□□□□ 0.54
COLCA1Q6ZS62 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.41■□□□□ 0.54
COLCA1Q6ZS62 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COLCA1Q6ZS62 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COLCA1Q6ZS62 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.41■□□□□ 0.54
COLCA1Q6ZS62 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.41■□□□□ 0.54
COLCA1Q6ZS62 TPRG1LP1-201ENST00000598702 760 ntBASIC18.41■□□□□ 0.54
COLCA1Q6ZS62 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COLCA1Q6ZS62 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COLCA1Q6ZS62 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COLCA1Q6ZS62 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.41■□□□□ 0.54
COLCA1Q6ZS62 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
COLCA1Q6ZS62 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.41■□□□□ 0.54
COLCA1Q6ZS62 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.41■□□□□ 0.54
COLCA1Q6ZS62 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.4■□□□□ 0.54
COLCA1Q6ZS62 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COLCA1Q6ZS62 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.4■□□□□ 0.54
COLCA1Q6ZS62 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COLCA1Q6ZS62 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COLCA1Q6ZS62 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COLCA1Q6ZS62 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
COLCA1Q6ZS62 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
COLCA1Q6ZS62 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.4■□□□□ 0.54
COLCA1Q6ZS62 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.4■□□□□ 0.54
COLCA1Q6ZS62 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.4■□□□□ 0.54
COLCA1Q6ZS62 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COLCA1Q6ZS62 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
COLCA1Q6ZS62 CLDN5-201ENST00000403084 2357 ntBASIC18.4■□□□□ 0.54
COLCA1Q6ZS62 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COLCA1Q6ZS62 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COLCA1Q6ZS62 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
COLCA1Q6ZS62 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.39■□□□□ 0.53
COLCA1Q6ZS62 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
COLCA1Q6ZS62 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COLCA1Q6ZS62 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COLCA1Q6ZS62 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.39■□□□□ 0.53
COLCA1Q6ZS62 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.39■□□□□ 0.53
COLCA1Q6ZS62 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COLCA1Q6ZS62 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COLCA1Q6ZS62 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.39■□□□□ 0.53
COLCA1Q6ZS62 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COLCA1Q6ZS62 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COLCA1Q6ZS62 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.39■□□□□ 0.53
COLCA1Q6ZS62 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
COLCA1Q6ZS62 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COLCA1Q6ZS62 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COLCA1Q6ZS62 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COLCA1Q6ZS62 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
COLCA1Q6ZS62 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.38■□□□□ 0.53
COLCA1Q6ZS62 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COLCA1Q6ZS62 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.38■□□□□ 0.53
COLCA1Q6ZS62 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COLCA1Q6ZS62 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COLCA1Q6ZS62 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COLCA1Q6ZS62 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
COLCA1Q6ZS62 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COLCA1Q6ZS62 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COLCA1Q6ZS62 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COLCA1Q6ZS62 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COLCA1Q6ZS62 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
COLCA1Q6ZS62 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
COLCA1Q6ZS62 Z98882.1-201ENST00000622160 2253 ntBASIC18.37■□□□□ 0.53
COLCA1Q6ZS62 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COLCA1Q6ZS62 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COLCA1Q6ZS62 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
COLCA1Q6ZS62 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.37■□□□□ 0.53
COLCA1Q6ZS62 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.37■□□□□ 0.53
COLCA1Q6ZS62 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COLCA1Q6ZS62 AC027612.3-201ENST00000413684 1047 ntBASIC18.37■□□□□ 0.53
COLCA1Q6ZS62 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.37■□□□□ 0.53
COLCA1Q6ZS62 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.37■□□□□ 0.53
COLCA1Q6ZS62 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.37■□□□□ 0.53
COLCA1Q6ZS62 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COLCA1Q6ZS62 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COLCA1Q6ZS62 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms