Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 KIF12-205ENST00000498016 400 ntTSL 511.73□□□□□ -0.539e-7■■■□□ 17.7
LSM11P83369 NDUFS7-212ENST00000540530 1707 ntTSL 217.5■□□□□ 0.398e-15■■■□□ 17.6
LSM11P83369 NDUFS7-213ENST00000543289 3356 ntTSL 217.45■□□□□ 0.388e-15■■■□□ 17.6
LSM11P83369 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.5■□□□□ 0.238e-15■■■□□ 17.6
LSM11P83369 NDUFS7-220ENST00000622587 802 ntTSL 515.79■□□□□ 0.128e-15■■■□□ 17.6
LSM11P83369 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.088e-15■■■□□ 17.6
LSM11P83369 NDUFS7-215ENST00000546172 869 ntTSL 515.41■□□□□ 0.068e-15■■■□□ 17.6
LSM11P83369 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.76□□□□□ -0.218e-15■■■□□ 17.6
LSM11P83369 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.76□□□□□ -0.218e-15■■■□□ 17.6
LSM11P83369 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.41□□□□□ -0.268e-15■■■□□ 17.6
LSM11P83369 NDUFS7-206ENST00000535382 3050 ntTSL 213.33□□□□□ -0.278e-15■■■□□ 17.6
LSM11P83369 NDUFS7-205ENST00000534853 745 ntTSL 513.21□□□□□ -0.298e-15■■■□□ 17.6
LSM11P83369 NDUFS7-214ENST00000545446 3089 ntTSL 213.14□□□□□ -0.318e-15■■■□□ 17.6
LSM11P83369 NDUFS7-217ENST00000591358 3743 nt12.2□□□□□ -0.468e-15■■■□□ 17.6
LSM11P83369 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.152e-6■■■□□ 17.6
LSM11P83369 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.482e-6■■■□□ 17.6
LSM11P83369 PTBP1-209ENST00000586481 578 ntTSL 317.29■□□□□ 0.361e-6■■■□□ 17.6
LSM11P83369 PTBP1-216ENST00000590887 642 ntTSL 311.76□□□□□ -0.531e-6■■■□□ 17.6
LSM11P83369 PTBP1-214ENST00000589575 749 ntTSL 311.3□□□□□ -0.61e-6■■■□□ 17.6
LSM11P83369 CAPN12-204ENST00000594552 1046 ntTSL 212.93□□□□□ -0.341e-6■■■□□ 17.6
LSM11P83369 CAPN12-209ENST00000597987 896 ntTSL 510.64□□□□□ -0.711e-6■■■□□ 17.6
LSM11P83369 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.012e-7■■■□□ 17.6
LSM11P83369 ASB1-207ENST00000473306 581 ntTSL 213.44□□□□□ -0.262e-7■■■□□ 17.6
LSM11P83369 ASB1-208ENST00000481566 701 ntTSL 512.75□□□□□ -0.372e-7■■■□□ 17.6
LSM11P83369 EPB41-208ENST00000460378 5212 ntTSL 1 (best)8.81□□□□□ -14e-6■■■□□ 17.6
LSM11P83369 NCLN-208ENST00000592737 2735 ntTSL 316.17■□□□□ 0.185e-7■■■□□ 17.5
LSM11P83369 NCLN-203ENST00000587740 1210 ntTSL 1 (best)13.73□□□□□ -0.215e-7■■■□□ 17.5
LSM11P83369 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.345e-7■■■□□ 17.5
LSM11P83369 NCLN-206ENST00000591062 460 ntTSL 512.68□□□□□ -0.385e-7■■■□□ 17.5
LSM11P83369 RNF123-210ENST00000487805 5882 ntTSL 211.65□□□□□ -0.541e-6■■■□□ 17.5
LSM11P83369 RNF123-209ENST00000486102 4564 ntTSL 1 (best)11.01□□□□□ -0.651e-6■■■□□ 17.5
LSM11P83369 RNF123-201ENST00000327697 4311 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.81e-6■■■□□ 17.5
LSM11P83369 RNF123-207ENST00000457726 4506 ntTSL 1 (best)9.9□□□□□ -0.821e-6■■■□□ 17.5
LSM11P83369 ACTB-203ENST00000417101 472 ntTSL 418.94■□□□□ 0.621e-18■■■□□ 17.5
LSM11P83369 SEMA4C-206ENST00000482925 3776 ntTSL 212.86□□□□□ -0.359e-8■■■□□ 17.5
LSM11P83369 KDM4B-206ENST00000588361 3039 ntTSL 214.55□□□□□ -0.086e-7■■■□□ 17.5
LSM11P83369 KDM4B-207ENST00000588961 560 ntTSL 48.92□□□□□ -0.986e-7■■■□□ 17.5
LSM11P83369 COL27A1-207ENST00000494090 5329 ntTSL 1 (best)16.88■□□□□ 0.291e-10■■■□□ 17.5
LSM11P83369 LINC01089-201ENST00000428029 1024 ntTSL 216.72■□□□□ 0.279e-10■■■□□ 17.5
LSM11P83369 LINC01089-210ENST00000543167 1059 ntTSL 215.37■□□□□ 0.057e-15■■■□□ 17.5
LSM11P83369 LINC01089-208ENST00000541694 875 ntTSL 213.49□□□□□ -0.257e-15■■■□□ 17.5
LSM11P83369 RFNG-204ENST00000578676 1078 ntTSL 318.41■□□□□ 0.542e-11■■■□□ 17.4
LSM11P83369 HEXDC-213ENST00000583354 686 ntTSL 517.27■□□□□ 0.362e-6■■■□□ 17.4
LSM11P83369 POLE-211ENST00000538196 551 ntTSL 411.03□□□□□ -0.643e-6■■■□□ 17.4
LSM11P83369 ATXN2L-222ENST00000567024 525 ntTSL 315.4■□□□□ 0.062e-12■■■□□ 17.4
LSM11P83369 AL355987.4-202ENST00000459985 1900 ntTSL 221.69■■□□□ 1.064e-11■■■□□ 17.4
LSM11P83369 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.014e-11■■■□□ 17.4
LSM11P83369 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.21■□□□□ 0.194e-11■■■□□ 17.4
LSM11P83369 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC11.15□□□□□ -0.624e-11■■■□□ 17.4
LSM11P83369 IRF3-212ENST00000596756 931 ntTSL 511.82□□□□□ -0.523e-6■■■□□ 17.4
LSM11P83369 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC24.99■■□□□ 1.597e-7■■■□□ 17.4
LSM11P83369 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.121e-8■■■□□ 17.4
LSM11P83369 AURKAIP1-205ENST00000489799 695 ntTSL 1 (best)21.6■■□□□ 1.051e-8■■■□□ 17.4
LSM11P83369 CARD9-203ENST00000460290 1061 ntTSL 321.53■■□□□ 1.041e-8■■■□□ 17.4
LSM11P83369 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.691e-8■■■□□ 17.4
LSM11P83369 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.587e-7■■■□□ 17.4
LSM11P83369 CARD9-206ENST00000489932 1912 ntTSL 518.13■□□□□ 0.491e-8■■■□□ 17.4
LSM11P83369 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.481e-8■■■□□ 17.4
LSM11P83369 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.54■□□□□ 0.41e-8■■■□□ 17.4
LSM11P83369 CARD9-204ENST00000481053 4060 ntTSL 216.24■□□□□ 0.191e-8■■■□□ 17.4
LSM11P83369 AURKAIP1-206ENST00000496905 608 ntTSL 215.91■□□□□ 0.141e-8■■■□□ 17.4
LSM11P83369 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.121e-8■■■□□ 17.4
LSM11P83369 CARD9-205ENST00000485975 4574 ntTSL 214.77□□□□□ -0.051e-8■■■□□ 17.4
LSM11P83369 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.071e-8■■■□□ 17.4
LSM11P83369 MRPL38-212ENST00000486101 767 ntTSL 210.52□□□□□ -0.731e-8■■■□□ 17.4
LSM11P83369 PLXNA3-201ENST00000369682 10885 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.741e-8■■■□□ 17.4
LSM11P83369 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.264e-7■■■□□ 17.4
LSM11P83369 SLC35C2-207ENST00000480329 919 ntTSL 216.68■□□□□ 0.263e-6■■■□□ 17.4
LSM11P83369 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.67■□□□□ 0.741e-10■■■□□ 17.4
LSM11P83369 CCNL1-226ENST00000631619 2457 ntTSL 516.85■□□□□ 0.291e-10■■■□□ 17.4
LSM11P83369 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.11e-10■■■□□ 17.4
LSM11P83369 CCNL1-216ENST00000475298 2362 ntTSL 1 (best)12.11□□□□□ -0.471e-10■■■□□ 17.4
LSM11P83369 CCNL1-214ENST00000471247 3671 ntTSL 1 (best)4.3□□□□□ -1.722e-6■■■□□ 17.4
LSM11P83369 CCNL1-215ENST00000474539 4799 ntTSL 1 (best)4.02□□□□□ -1.772e-6■■■□□ 17.4
LSM11P83369 CCNL1-204ENST00000464316 3843 ntTSL 1 (best)3.55□□□□□ -1.842e-6■■■□□ 17.4
LSM11P83369 TCEA3-203ENST00000450454 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.721e-6■■■□□ 17.4
LSM11P83369 SRRT-204ENST00000448764 1607 ntTSL 515.47■□□□□ 0.071e-6■■■□□ 17.4
LSM11P83369 CCNG2-203ENST00000497512 2051 ntTSL 1 (best)25.12■■□□□ 1.613e-7■■■□□ 17.4
LSM11P83369 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.313e-7■■■□□ 17.4
LSM11P83369 MTA1-209ENST00000469140 1666 ntTSL 521.47■■□□□ 1.033e-7■■■□□ 17.4
LSM11P83369 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.963e-7■■■□□ 17.4
LSM11P83369 ZNF639-207ENST00000491818 1228 ntTSL 520.42■□□□□ 0.863e-7■■■□□ 17.4
LSM11P83369 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.773e-7■■■□□ 17.4
LSM11P83369 PFKL-206ENST00000467315 1947 ntTSL 217.89■□□□□ 0.452e-10■■■□□ 17.4
LSM11P83369 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.253e-7■■■□□ 17.4
LSM11P83369 PCNP-207ENST00000498274 786 ntTSL 216.18■□□□□ 0.183e-10■■■□□ 17.4
LSM11P83369 PFKL-211ENST00000498841 3122 ntTSL 1 (best)15.76■□□□□ 0.112e-10■■■□□ 17.4
LSM11P83369 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.073e-10■■■□□ 17.4
LSM11P83369 APIP-202ENST00000527830 1042 ntTSL 215.04■□□□□ -03e-7■■■□□ 17.4
LSM11P83369 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.013e-7■■■□□ 17.4
LSM11P83369 ZNF639-204ENST00000481587 584 ntTSL 314.78□□□□□ -0.043e-7■■■□□ 17.4
LSM11P83369 BIRC6-208ENST00000470250 472 ntTSL 213.67□□□□□ -0.223e-7■■■□□ 17.4
LSM11P83369 PFKL-204ENST00000460521 2818 ntTSL 213.65□□□□□ -0.222e-10■■■□□ 17.4
LSM11P83369 PCNP-202ENST00000460231 2165 ntTSL 1 (best)13.3□□□□□ -0.283e-10■■■□□ 17.4
LSM11P83369 KIF13B-202ENST00000522355 2630 ntTSL 212.69□□□□□ -0.383e-7■■■□□ 17.4
LSM11P83369 PCNP-206ENST00000486406 742 ntTSL 212.41□□□□□ -0.423e-10■■■□□ 17.4
LSM11P83369 POU2F1-211ENST00000492850 615 ntTSL 512.26□□□□□ -0.453e-7■■■□□ 17.4
LSM11P83369 ZNF639-202ENST00000466264 1117 ntTSL 1 (best)11.92□□□□□ -0.53e-7■■■□□ 17.4
LSM11P83369 PCNP-205ENST00000470490 589 ntTSL 511.19□□□□□ -0.623e-10■■■□□ 17.4
LSM11P83369 KIF13B-203ENST00000522846 1965 ntTSL 210.85□□□□□ -0.673e-7■■■□□ 17.4
Retrieved 100 of 11,495 protein–RNA pairs in 63.4 ms