Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.5■□□□□ 0.55
GDNFP39905 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GDNFP39905 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.5■□□□□ 0.55
GDNFP39905 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GDNFP39905 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
GDNFP39905 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GDNFP39905 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
GDNFP39905 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.49■□□□□ 0.55
GDNFP39905 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
GDNFP39905 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.49■□□□□ 0.55
GDNFP39905 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GDNFP39905 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GDNFP39905 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GDNFP39905 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GDNFP39905 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GDNFP39905 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
GDNFP39905 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.49■□□□□ 0.55
GDNFP39905 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.49■□□□□ 0.55
GDNFP39905 MIR6724-1-201ENST00000616420 92 ntBASIC18.49■□□□□ 0.55
GDNFP39905 MIR6724-2-201ENST00000616483 92 ntBASIC18.49■□□□□ 0.55
GDNFP39905 MIR6724-4-201ENST00000617390 92 ntBASIC18.49■□□□□ 0.55
GDNFP39905 MIR6724-3-201ENST00000622482 92 ntBASIC18.49■□□□□ 0.55
GDNFP39905 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
GDNFP39905 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.49■□□□□ 0.55
GDNFP39905 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
GDNFP39905 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GDNFP39905 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GDNFP39905 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GDNFP39905 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GDNFP39905 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GDNFP39905 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GDNFP39905 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GDNFP39905 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
GDNFP39905 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.49■□□□□ 0.55
GDNFP39905 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GDNFP39905 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.49■□□□□ 0.55
GDNFP39905 LINC01529-204ENST00000636474 1715 ntBASIC18.49■□□□□ 0.55
GDNFP39905 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
GDNFP39905 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GDNFP39905 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
GDNFP39905 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GDNFP39905 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
GDNFP39905 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GDNFP39905 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GDNFP39905 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
GDNFP39905 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.48■□□□□ 0.55
GDNFP39905 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GDNFP39905 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
GDNFP39905 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
GDNFP39905 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GDNFP39905 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
GDNFP39905 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GDNFP39905 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GDNFP39905 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GDNFP39905 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.47■□□□□ 0.55
GDNFP39905 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GDNFP39905 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GDNFP39905 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.47■□□□□ 0.55
GDNFP39905 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.47■□□□□ 0.55
GDNFP39905 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.47■□□□□ 0.55
GDNFP39905 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
GDNFP39905 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
GDNFP39905 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GDNFP39905 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GDNFP39905 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
GDNFP39905 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GDNFP39905 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
GDNFP39905 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GDNFP39905 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GDNFP39905 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
GDNFP39905 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.46■□□□□ 0.55
GDNFP39905 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.46■□□□□ 0.55
GDNFP39905 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
GDNFP39905 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.46■□□□□ 0.55
GDNFP39905 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.46■□□□□ 0.55
GDNFP39905 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.46■□□□□ 0.55
GDNFP39905 CA15P2-201ENST00000611168 834 ntBASIC18.46■□□□□ 0.55
GDNFP39905 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
GDNFP39905 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
GDNFP39905 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.46■□□□□ 0.55
GDNFP39905 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
GDNFP39905 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GDNFP39905 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
GDNFP39905 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
GDNFP39905 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
GDNFP39905 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.46■□□□□ 0.55
GDNFP39905 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.45■□□□□ 0.54
GDNFP39905 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GDNFP39905 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.45■□□□□ 0.54
GDNFP39905 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
GDNFP39905 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GDNFP39905 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GDNFP39905 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
GDNFP39905 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
GDNFP39905 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.45■□□□□ 0.54
GDNFP39905 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
GDNFP39905 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
GDNFP39905 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
GDNFP39905 AC009102.2-201ENST00000606772 1639 ntBASIC18.45■□□□□ 0.54
GDNFP39905 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms