Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNCAP37840 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SNCAP37840 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNCAP37840 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SNCAP37840 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SNCAP37840 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SNCAP37840 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.46■□□□□ 0.39
SNCAP37840 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNCAP37840 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.46■□□□□ 0.39
SNCAP37840 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SNCAP37840 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNCAP37840 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SNCAP37840 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNCAP37840 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SNCAP37840 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.46■□□□□ 0.39
SNCAP37840 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.46■□□□□ 0.38
SNCAP37840 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNCAP37840 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNCAP37840 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNCAP37840 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNCAP37840 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNCAP37840 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNCAP37840 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNCAP37840 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.45■□□□□ 0.38
SNCAP37840 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
SNCAP37840 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.45■□□□□ 0.38
SNCAP37840 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNCAP37840 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNCAP37840 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
SNCAP37840 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNCAP37840 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNCAP37840 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.45■□□□□ 0.38
SNCAP37840 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNCAP37840 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNCAP37840 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNCAP37840 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNCAP37840 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNCAP37840 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SNCAP37840 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SNCAP37840 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SNCAP37840 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.44■□□□□ 0.38
SNCAP37840 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.44■□□□□ 0.38
SNCAP37840 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SNCAP37840 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.44■□□□□ 0.38
SNCAP37840 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.44■□□□□ 0.38
SNCAP37840 Z92544.1-202ENST00000571933 1220 ntBASIC17.44■□□□□ 0.38
SNCAP37840 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
SNCAP37840 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNCAP37840 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNCAP37840 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SNCAP37840 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNCAP37840 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SNCAP37840 AC138932.1-201ENST00000534164 6830 ntBASIC17.44■□□□□ 0.38
SNCAP37840 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.43■□□□□ 0.38
SNCAP37840 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNCAP37840 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNCAP37840 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.43■□□□□ 0.38
SNCAP37840 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SNCAP37840 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.43■□□□□ 0.38
SNCAP37840 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNCAP37840 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.43■□□□□ 0.38
SNCAP37840 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.43■□□□□ 0.38
SNCAP37840 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SNCAP37840 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNCAP37840 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SNCAP37840 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.43■□□□□ 0.38
SNCAP37840 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNCAP37840 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNCAP37840 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SNCAP37840 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNCAP37840 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.42■□□□□ 0.38
SNCAP37840 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.42■□□□□ 0.38
SNCAP37840 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNCAP37840 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.42■□□□□ 0.38
SNCAP37840 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNCAP37840 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SNCAP37840 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNCAP37840 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SNCAP37840 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SNCAP37840 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.42■□□□□ 0.38
SNCAP37840 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNCAP37840 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.42■□□□□ 0.38
SNCAP37840 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNCAP37840 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNCAP37840 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNCAP37840 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNCAP37840 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SNCAP37840 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNCAP37840 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.42■□□□□ 0.38
SNCAP37840 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNCAP37840 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNCAP37840 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNCAP37840 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.41■□□□□ 0.38
SNCAP37840 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNCAP37840 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNCAP37840 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNCAP37840 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNCAP37840 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNCAP37840 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SNCAP37840 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms