Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 RNF217-210ENST00000521654 11325 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.174e-7■■□□□ 11.8
XRCC6P12956 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24.24■■□□□ 1.473e-50■■□□□ 11.8
XRCC6P12956 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.98■■□□□ 1.113e-50■■□□□ 11.8
XRCC6P12956 LRRC75A-AS1-224ENST00000581718 574 ntTSL 221.61■■□□□ 1.053e-50■■□□□ 11.8
XRCC6P12956 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.61■■□□□ 1.053e-50■■□□□ 11.8
XRCC6P12956 LRRC75A-AS1-203ENST00000472367 794 ntTSL 320.01■□□□□ 0.793e-50■■□□□ 11.8
XRCC6P12956 LRRC75A-AS1-212ENST00000483588 688 ntTSL 319.33■□□□□ 0.683e-50■■□□□ 11.8
XRCC6P12956 LRRC75A-AS1-229ENST00000584177 574 ntTSL 418.79■□□□□ 0.63e-50■■□□□ 11.8
XRCC6P12956 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC15.82■□□□□ 0.123e-50■■□□□ 11.8
XRCC6P12956 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC15.82■□□□□ 0.123e-50■■□□□ 11.8
XRCC6P12956 LRRC75A-AS1-217ENST00000497774 1662 ntTSL 514.79□□□□□ -0.043e-50■■□□□ 11.8
XRCC6P12956 LRRC75A-AS1-206ENST00000477249 891 ntTSL 514.37□□□□□ -0.113e-50■■□□□ 11.8
XRCC6P12956 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC13.28□□□□□ -0.283e-50■■□□□ 11.8
XRCC6P12956 LRRC75A-AS1-207ENST00000478103 712 ntTSL 311.54□□□□□ -0.563e-50■■□□□ 11.8
XRCC6P12956 LRRC75A-AS1-227ENST00000583400 712 ntTSL 411.1□□□□□ -0.633e-50■■□□□ 11.8
XRCC6P12956 LRRC75A-AS1-223ENST00000581361 843 ntTSL 1 (best) BASIC11.03□□□□□ -0.643e-50■■□□□ 11.8
XRCC6P12956 LRRC75A-AS1-222ENST00000580770 572 ntTSL 410.87□□□□□ -0.673e-50■■□□□ 11.8
XRCC6P12956 LRRC75A-AS1-221ENST00000580180 753 ntTSL 29.9□□□□□ -0.823e-50■■□□□ 11.8
XRCC6P12956 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC8.74□□□□□ -1.013e-50■■□□□ 11.8
XRCC6P12956 LRRC75A-AS1-210ENST00000481898 993 ntTSL 1 (best)7.87□□□□□ -1.153e-50■■□□□ 11.8
XRCC6P12956 LRRC75A-AS1-211ENST00000483140 936 ntTSL 26.95□□□□□ -1.33e-50■■□□□ 11.8
XRCC6P12956 SNORD1B-201ENST00000363091 84 ntBASIC-0.9□□□□□ -2.559e-12■■□□□ 11.8
XRCC6P12956 RN7SKP255-201ENST00000363442 313 ntBASIC14.89□□□□□ -0.037e-17■■□□□ 11.8
XRCC6P12956 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.933e-11■■□□□ 11.8
XRCC6P12956 FAM178B-205ENST00000494172 592 ntTSL 320.1■□□□□ 0.813e-11■■□□□ 11.8
XRCC6P12956 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.13e-11■■□□□ 11.8
XRCC6P12956 FAM178B-202ENST00000470789 722 ntTSL 1 (best)12.71□□□□□ -0.373e-11■■□□□ 11.8
XRCC6P12956 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.778e-7■■□□□ 11.8
XRCC6P12956 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.748e-7■■□□□ 11.8
XRCC6P12956 COQ8A-206ENST00000479852 1938 ntTSL 1 (best)25.53■■□□□ 1.688e-7■■□□□ 11.8
XRCC6P12956 COCH-209ENST00000555881 782 ntTSL 224.44■■□□□ 1.58e-7■■□□□ 11.8
XRCC6P12956 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.72■■□□□ 1.398e-7■■□□□ 11.8
XRCC6P12956 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.59■■□□□ 1.378e-7■■□□□ 11.8
XRCC6P12956 TRIM13-203ENST00000378183 1251 ntTSL 222.93■■□□□ 1.268e-7■■□□□ 11.8
XRCC6P12956 COCH-206ENST00000553772 554 ntTSL 422.35■■□□□ 1.178e-7■■□□□ 11.8
XRCC6P12956 IRAK1-210ENST00000455690 784 ntTSL 321.92■■□□□ 1.18e-7■■□□□ 11.8
XRCC6P12956 COCH-210ENST00000556908 775 ntTSL 321.67■■□□□ 1.068e-7■■□□□ 11.8
XRCC6P12956 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.858e-7■■□□□ 11.8
XRCC6P12956 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.88e-7■■□□□ 11.8
XRCC6P12956 COQ8A-207ENST00000485462 2141 ntTSL 1 (best)19.63■□□□□ 0.738e-7■■□□□ 11.8
XRCC6P12956 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.718e-7■■□□□ 11.8
XRCC6P12956 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.688e-7■■□□□ 11.8
XRCC6P12956 IRAK1-208ENST00000444230 1125 ntTSL 519.23■□□□□ 0.678e-7■■□□□ 11.8
XRCC6P12956 COCH-203ENST00000460581 2688 ntTSL 2 BASIC19.11■□□□□ 0.658e-7■■□□□ 11.8
XRCC6P12956 TRIM13-208ENST00000478111 478 ntTSL 218.56■□□□□ 0.568e-7■■□□□ 11.8
XRCC6P12956 NDE1-205ENST00000572756 915 ntTSL 518.01■□□□□ 0.478e-7■■□□□ 11.8
XRCC6P12956 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.428e-7■■□□□ 11.8
XRCC6P12956 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.388e-7■■□□□ 11.8
XRCC6P12956 NDE1-203ENST00000570727 588 ntTSL 416.43■□□□□ 0.228e-7■■□□□ 11.8
XRCC6P12956 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.128e-7■■□□□ 11.8
XRCC6P12956 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.058e-7■■□□□ 11.8
XRCC6P12956 NIPA1-203ENST00000557930 582 ntTSL 215.14■□□□□ 0.018e-7■■□□□ 11.8
XRCC6P12956 IRAK1-202ENST00000369974 3319 ntTSL 1 (best) BASIC14.48□□□□□ -0.098e-7■■□□□ 11.8
XRCC6P12956 IRAK1-213ENST00000477274 705 ntTSL 514.46□□□□□ -0.098e-7■■□□□ 11.8
XRCC6P12956 TRIM13-205ENST00000442421 692 ntTSL 514.11□□□□□ -0.158e-7■■□□□ 11.8
XRCC6P12956 GGA2-201ENST00000309859 5973 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.228e-7■■□□□ 11.8
XRCC6P12956 TRIM13-207ENST00000474805 403 ntTSL 513.65□□□□□ -0.228e-7■■□□□ 11.8
XRCC6P12956 NIPA1-205ENST00000560069 575 ntTSL 413.64□□□□□ -0.238e-7■■□□□ 11.8
XRCC6P12956 NIPA1-204ENST00000559448 2799 ntTSL 213.43□□□□□ -0.268e-7■■□□□ 11.8
XRCC6P12956 NDE1-201ENST00000396354 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.558e-7■■□□□ 11.8
XRCC6P12956 GGA2-214ENST00000569182 587 ntTSL 411.12□□□□□ -0.638e-7■■□□□ 11.8
XRCC6P12956 NIPA1-206ENST00000560105 375 ntTSL 211.06□□□□□ -0.648e-7■■□□□ 11.8
XRCC6P12956 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.728e-7■■□□□ 11.8
XRCC6P12956 NDE1-207ENST00000573203 762 ntTSL 310.09□□□□□ -0.798e-7■■□□□ 11.8
XRCC6P12956 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.928e-7■■□□□ 11.8
XRCC6P12956 LDHB-201ENST00000350669 1303 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.968e-7■■□□□ 11.8
XRCC6P12956 LDHB-206ENST00000470985 678 ntTSL 1 (best)6.97□□□□□ -1.298e-7■■□□□ 11.8
XRCC6P12956 LDHB-209ENST00000542765 672 ntTSL 24.24□□□□□ -1.738e-7■■□□□ 11.8
XRCC6P12956 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.814e-8■■□□□ 11.8
XRCC6P12956 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.734e-8■■□□□ 11.8
XRCC6P12956 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.714e-8■■□□□ 11.8
XRCC6P12956 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.094e-8■■□□□ 11.8
XRCC6P12956 CIZ1-218ENST00000476727 1205 ntTSL 519.63■□□□□ 0.734e-8■■□□□ 11.8
XRCC6P12956 CIZ1-220ENST00000485862 843 ntTSL 218.13■□□□□ 0.494e-8■■□□□ 11.8
XRCC6P12956 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.194e-8■■□□□ 11.8
XRCC6P12956 CIZ1-225ENST00000538431 2996 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -04e-8■■□□□ 11.8
XRCC6P12956 CIZ1-228ENST00000634901 3462 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.014e-8■■□□□ 11.8
XRCC6P12956 CIZ1-201ENST00000277465 2742 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.144e-8■■□□□ 11.8
XRCC6P12956 CIZ1-207ENST00000393608 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.184e-8■■□□□ 11.8
XRCC6P12956 CIZ1-208ENST00000415526 2508 ntAPPRIS ALT2 TSL 1 (best)13.2□□□□□ -0.34e-8■■□□□ 11.8
XRCC6P12956 CIZ1-219ENST00000485001 596 ntTSL 312.86□□□□□ -0.354e-8■■□□□ 11.8
XRCC6P12956 CIZ1-213ENST00000471839 928 ntAPPRIS ALT2 TSL 211.01□□□□□ -0.654e-8■■□□□ 11.8
XRCC6P12956 CIZ1-210ENST00000461765 677 ntTSL 38.92□□□□□ -0.984e-8■■□□□ 11.8
XRCC6P12956 CIZ1-212ENST00000471773 717 ntTSL 28.79□□□□□ -14e-8■■□□□ 11.8
XRCC6P12956 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.495e-6■■□□□ 11.7
XRCC6P12956 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.325e-6■■□□□ 11.7
XRCC6P12956 FAM120B-201ENST00000476287 5155 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.735e-6■■□□□ 11.7
XRCC6P12956 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.765e-6■■□□□ 11.7
XRCC6P12956 SH3D21-202ENST00000474766 2043 ntTSL 1 (best)26.58■■□□□ 1.852e-6■■□□□ 11.7
XRCC6P12956 SH3D21-203ENST00000480549 3182 ntTSL 220.73■□□□□ 0.912e-6■■□□□ 11.7
XRCC6P12956 RPL4-204ENST00000563473 475 ntTSL 36.22□□□□□ -1.411e-19■■□□□ 11.7
XRCC6P12956 SNORD18C-201ENST00000362704 69 ntBASIC-1.61□□□□□ -2.671e-19■■□□□ 11.7
XRCC6P12956 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.033e-6■■□□□ 11.7
XRCC6P12956 RICTOR-206ENST00000510711 3126 ntTSL 212.24□□□□□ -0.452e-10■■□□□ 11.7
XRCC6P12956 RICTOR-209ENST00000514735 686 ntTSL 39.37□□□□□ -0.912e-10■■□□□ 11.7
XRCC6P12956 RICTOR-208ENST00000513566 1762 ntTSL 1 (best)7.69□□□□□ -1.182e-10■■□□□ 11.7
XRCC6P12956 CHTF18-216ENST00000565787 607 ntTSL 526.38■■□□□ 1.811e-6■■□□□ 11.7
XRCC6P12956 MIR19A-201ENST00000384878 82 ntBASIC4.21□□□□□ -1.741e-12■■□□□ 11.7
XRCC6P12956 NSD2-218ENST00000508355 2092 ntTSL 1 (best)16.63■□□□□ 0.255e-6■■□□□ 11.7
XRCC6P12956 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.755e-6■■□□□ 11.7
Retrieved 100 of 6,788 protein–RNA pairs in 47.3 ms