Protein–RNA interactions for Protein: P0C5Y9

H2AFB1, Histone H2A-Bbd type 1, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFB1P0C5Y9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
H2AFB1P0C5Y9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.2■□□□□ 0.34
H2AFB1P0C5Y9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H2AFB1P0C5Y9 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.2■□□□□ 0.34
H2AFB1P0C5Y9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
H2AFB1P0C5Y9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
H2AFB1P0C5Y9 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
H2AFB1P0C5Y9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.19■□□□□ 0.34
H2AFB1P0C5Y9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
H2AFB1P0C5Y9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
H2AFB1P0C5Y9 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
H2AFB1P0C5Y9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
H2AFB1P0C5Y9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.19■□□□□ 0.34
H2AFB1P0C5Y9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
H2AFB1P0C5Y9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
H2AFB1P0C5Y9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.19■□□□□ 0.34
H2AFB1P0C5Y9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
H2AFB1P0C5Y9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
H2AFB1P0C5Y9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
H2AFB1P0C5Y9 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
H2AFB1P0C5Y9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
H2AFB1P0C5Y9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
H2AFB1P0C5Y9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
H2AFB1P0C5Y9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
H2AFB1P0C5Y9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
H2AFB1P0C5Y9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
H2AFB1P0C5Y9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
H2AFB1P0C5Y9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
H2AFB1P0C5Y9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2AFB1P0C5Y9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2AFB1P0C5Y9 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2AFB1P0C5Y9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2AFB1P0C5Y9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
H2AFB1P0C5Y9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2AFB1P0C5Y9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
H2AFB1P0C5Y9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.18■□□□□ 0.34
H2AFB1P0C5Y9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2AFB1P0C5Y9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
H2AFB1P0C5Y9 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
H2AFB1P0C5Y9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
H2AFB1P0C5Y9 AC007029.1-201ENST00000604183 313 ntBASIC17.18■□□□□ 0.34
H2AFB1P0C5Y9 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.18■□□□□ 0.34
H2AFB1P0C5Y9 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2AFB1P0C5Y9 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2AFB1P0C5Y9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
H2AFB1P0C5Y9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2AFB1P0C5Y9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
H2AFB1P0C5Y9 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
H2AFB1P0C5Y9 SMG8-203ENST00000578922 2178 ntBASIC17.18■□□□□ 0.34
H2AFB1P0C5Y9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
H2AFB1P0C5Y9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
H2AFB1P0C5Y9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.17■□□□□ 0.34
H2AFB1P0C5Y9 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.17■□□□□ 0.34
H2AFB1P0C5Y9 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
H2AFB1P0C5Y9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.17■□□□□ 0.34
H2AFB1P0C5Y9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
H2AFB1P0C5Y9 AFG3L1P-217ENST00000557444 2447 ntBASIC17.17■□□□□ 0.34
H2AFB1P0C5Y9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
H2AFB1P0C5Y9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
H2AFB1P0C5Y9 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
H2AFB1P0C5Y9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
H2AFB1P0C5Y9 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
H2AFB1P0C5Y9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.17■□□□□ 0.34
H2AFB1P0C5Y9 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.17■□□□□ 0.34
H2AFB1P0C5Y9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.17■□□□□ 0.34
H2AFB1P0C5Y9 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.17■□□□□ 0.34
H2AFB1P0C5Y9 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.17■□□□□ 0.34
H2AFB1P0C5Y9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
H2AFB1P0C5Y9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
H2AFB1P0C5Y9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
H2AFB1P0C5Y9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2AFB1P0C5Y9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2AFB1P0C5Y9 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2AFB1P0C5Y9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2AFB1P0C5Y9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
H2AFB1P0C5Y9 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2AFB1P0C5Y9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
H2AFB1P0C5Y9 AC138932.1-201ENST00000534164 6830 ntBASIC17.16■□□□□ 0.34
H2AFB1P0C5Y9 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2AFB1P0C5Y9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.16■□□□□ 0.34
H2AFB1P0C5Y9 AC098818.2-201ENST00000564925 2320 ntBASIC17.16■□□□□ 0.34
H2AFB1P0C5Y9 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2AFB1P0C5Y9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
H2AFB1P0C5Y9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.16■□□□□ 0.34
H2AFB1P0C5Y9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.15■□□□□ 0.34
H2AFB1P0C5Y9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2AFB1P0C5Y9 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2AFB1P0C5Y9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2AFB1P0C5Y9 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
H2AFB1P0C5Y9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.15■□□□□ 0.34
H2AFB1P0C5Y9 RPS2P7-201ENST00000447334 885 ntBASIC17.15■□□□□ 0.34
H2AFB1P0C5Y9 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC17.15■□□□□ 0.34
H2AFB1P0C5Y9 LINC01960-201ENST00000563759 1884 ntBASIC17.15■□□□□ 0.34
H2AFB1P0C5Y9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
H2AFB1P0C5Y9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2AFB1P0C5Y9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
H2AFB1P0C5Y9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.15■□□□□ 0.34
H2AFB1P0C5Y9 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2AFB1P0C5Y9 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H2AFB1P0C5Y9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms