Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.15■□□□□ 0.66
PFDN1O60925 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN1O60925 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.15■□□□□ 0.66
PFDN1O60925 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
PFDN1O60925 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.15■□□□□ 0.66
PFDN1O60925 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.15■□□□□ 0.66
PFDN1O60925 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN1O60925 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN1O60925 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.15■□□□□ 0.66
PFDN1O60925 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN1O60925 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN1O60925 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PFDN1O60925 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
PFDN1O60925 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PFDN1O60925 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PFDN1O60925 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PFDN1O60925 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PFDN1O60925 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.14■□□□□ 0.65
PFDN1O60925 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
PFDN1O60925 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
PFDN1O60925 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PFDN1O60925 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.14■□□□□ 0.65
PFDN1O60925 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.14■□□□□ 0.65
PFDN1O60925 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PFDN1O60925 Z98882.1-201ENST00000622160 2253 ntBASIC19.14■□□□□ 0.65
PFDN1O60925 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PFDN1O60925 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PFDN1O60925 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PFDN1O60925 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PFDN1O60925 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PFDN1O60925 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PFDN1O60925 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.13■□□□□ 0.65
PFDN1O60925 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.13■□□□□ 0.65
PFDN1O60925 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.13■□□□□ 0.65
PFDN1O60925 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PFDN1O60925 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.13■□□□□ 0.65
PFDN1O60925 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.13■□□□□ 0.65
PFDN1O60925 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PFDN1O60925 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PFDN1O60925 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PFDN1O60925 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PFDN1O60925 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PFDN1O60925 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.13■□□□□ 0.65
PFDN1O60925 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PFDN1O60925 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PFDN1O60925 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PFDN1O60925 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.13■□□□□ 0.65
PFDN1O60925 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PFDN1O60925 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PFDN1O60925 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PFDN1O60925 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PFDN1O60925 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PFDN1O60925 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PFDN1O60925 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PFDN1O60925 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PFDN1O60925 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.12■□□□□ 0.65
PFDN1O60925 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PFDN1O60925 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PFDN1O60925 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PFDN1O60925 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PFDN1O60925 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PFDN1O60925 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PFDN1O60925 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PFDN1O60925 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PFDN1O60925 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PFDN1O60925 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PFDN1O60925 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.11■□□□□ 0.65
PFDN1O60925 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PFDN1O60925 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PFDN1O60925 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PFDN1O60925 NEFHP1-201ENST00000412845 2629 ntBASIC19.11■□□□□ 0.65
PFDN1O60925 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PFDN1O60925 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PFDN1O60925 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PFDN1O60925 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PFDN1O60925 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PFDN1O60925 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PFDN1O60925 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PFDN1O60925 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PFDN1O60925 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PFDN1O60925 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PFDN1O60925 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
PFDN1O60925 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.11■□□□□ 0.65
PFDN1O60925 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.11■□□□□ 0.65
PFDN1O60925 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PFDN1O60925 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PFDN1O60925 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PFDN1O60925 BCL2-203ENST00000589955 5011 ntBASIC19.1■□□□□ 0.65
PFDN1O60925 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PFDN1O60925 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.1■□□□□ 0.65
PFDN1O60925 TNXA-203ENST00000507684 2038 ntBASIC19.1■□□□□ 0.65
PFDN1O60925 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PFDN1O60925 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PFDN1O60925 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PFDN1O60925 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PFDN1O60925 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PFDN1O60925 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PFDN1O60925 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
PFDN1O60925 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
PFDN1O60925 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms