Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AL354811.1-201ENST00000610286 706 ntBASIC20.25■□□□□ 0.83
PROM1O43490 BX005040.4-201ENST00000637145 1518 ntBASIC20.25■□□□□ 0.83
PROM1O43490 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PROM1O43490 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PROM1O43490 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PROM1O43490 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
PROM1O43490 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PROM1O43490 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PROM1O43490 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PROM1O43490 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PROM1O43490 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PROM1O43490 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PROM1O43490 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PROM1O43490 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PROM1O43490 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PROM1O43490 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PROM1O43490 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.24■□□□□ 0.83
PROM1O43490 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.24■□□□□ 0.83
PROM1O43490 AL358852.1-201ENST00000623174 1268 ntBASIC20.24■□□□□ 0.83
PROM1O43490 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.24■□□□□ 0.83
PROM1O43490 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.24■□□□□ 0.83
PROM1O43490 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PROM1O43490 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
PROM1O43490 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.23■□□□□ 0.83
PROM1O43490 AC010542.4-201ENST00000563151 1910 ntBASIC20.23■□□□□ 0.83
PROM1O43490 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PROM1O43490 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.23■□□□□ 0.83
PROM1O43490 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PROM1O43490 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PROM1O43490 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PROM1O43490 AC009237.3-201ENST00000393279 1427 ntBASIC20.23■□□□□ 0.83
PROM1O43490 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.23■□□□□ 0.83
PROM1O43490 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PROM1O43490 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.23■□□□□ 0.83
PROM1O43490 FBXW4P1-201ENST00000426721 2239 ntBASIC20.23■□□□□ 0.83
PROM1O43490 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PROM1O43490 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PROM1O43490 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
PROM1O43490 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PROM1O43490 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PROM1O43490 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.23■□□□□ 0.83
PROM1O43490 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.22■□□□□ 0.83
PROM1O43490 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PROM1O43490 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PROM1O43490 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PROM1O43490 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PROM1O43490 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PROM1O43490 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
PROM1O43490 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PROM1O43490 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
PROM1O43490 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PROM1O43490 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PROM1O43490 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.22■□□□□ 0.83
PROM1O43490 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PROM1O43490 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PROM1O43490 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.22■□□□□ 0.83
PROM1O43490 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PROM1O43490 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.22■□□□□ 0.83
PROM1O43490 PKD1P6-201ENST00000343738 4769 ntBASIC20.22■□□□□ 0.83
PROM1O43490 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PROM1O43490 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PROM1O43490 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.21■□□□□ 0.83
PROM1O43490 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.21■□□□□ 0.83
PROM1O43490 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.21■□□□□ 0.83
PROM1O43490 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PROM1O43490 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.21■□□□□ 0.83
PROM1O43490 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PROM1O43490 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PROM1O43490 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.21■□□□□ 0.83
PROM1O43490 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.21■□□□□ 0.83
PROM1O43490 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.21■□□□□ 0.83
PROM1O43490 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.21■□□□□ 0.83
PROM1O43490 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PROM1O43490 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.21■□□□□ 0.83
PROM1O43490 AP006587.3-201ENST00000525742 1516 ntBASIC20.21■□□□□ 0.83
PROM1O43490 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PROM1O43490 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PROM1O43490 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PROM1O43490 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PROM1O43490 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PROM1O43490 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.2■□□□□ 0.82
PROM1O43490 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.2■□□□□ 0.82
PROM1O43490 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PROM1O43490 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PROM1O43490 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PROM1O43490 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.2■□□□□ 0.82
PROM1O43490 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.2■□□□□ 0.82
PROM1O43490 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
PROM1O43490 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PROM1O43490 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.2■□□□□ 0.82
PROM1O43490 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.2■□□□□ 0.82
PROM1O43490 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.2■□□□□ 0.82
PROM1O43490 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.2■□□□□ 0.82
PROM1O43490 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
PROM1O43490 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PROM1O43490 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.2■□□□□ 0.82
PROM1O43490 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.2■□□□□ 0.82
PROM1O43490 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PROM1O43490 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PROM1O43490 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms