Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PPM1DO15297 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PPM1DO15297 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.78■□□□□ 0.92
PPM1DO15297 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.78■□□□□ 0.92
PPM1DO15297 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.78■□□□□ 0.92
PPM1DO15297 AL034346.1-201ENST00000568244 1277 ntBASIC20.78■□□□□ 0.92
PPM1DO15297 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PPM1DO15297 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PPM1DO15297 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PPM1DO15297 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.78■□□□□ 0.92
PPM1DO15297 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PPM1DO15297 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PPM1DO15297 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PPM1DO15297 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.77■□□□□ 0.92
PPM1DO15297 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.77■□□□□ 0.92
PPM1DO15297 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PPM1DO15297 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPM1DO15297 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPM1DO15297 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.77■□□□□ 0.92
PPM1DO15297 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.77■□□□□ 0.92
PPM1DO15297 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.77■□□□□ 0.92
PPM1DO15297 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.77■□□□□ 0.92
PPM1DO15297 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.77■□□□□ 0.92
PPM1DO15297 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPM1DO15297 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPM1DO15297 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPM1DO15297 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PPM1DO15297 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PPM1DO15297 EP400NL-214ENST00000641289 2402 ntBASIC20.77■□□□□ 0.92
PPM1DO15297 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPM1DO15297 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PPM1DO15297 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.77■□□□□ 0.92
PPM1DO15297 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PPM1DO15297 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PPM1DO15297 AC127496.7-201ENST00000625110 1798 ntBASIC20.77■□□□□ 0.91
PPM1DO15297 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
PPM1DO15297 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPM1DO15297 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
PPM1DO15297 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPM1DO15297 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
PPM1DO15297 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PPM1DO15297 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PPM1DO15297 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.76■□□□□ 0.91
PPM1DO15297 HLA-L-209ENST00000420110 1011 ntBASIC20.76■□□□□ 0.91
PPM1DO15297 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPM1DO15297 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PPM1DO15297 AP001160.3-201ENST00000601484 763 ntBASIC20.76■□□□□ 0.91
PPM1DO15297 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PPM1DO15297 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.76■□□□□ 0.91
PPM1DO15297 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
PPM1DO15297 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPM1DO15297 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPM1DO15297 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPM1DO15297 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PPM1DO15297 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PPM1DO15297 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPM1DO15297 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPM1DO15297 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.75■□□□□ 0.91
PPM1DO15297 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PPM1DO15297 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPM1DO15297 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.75■□□□□ 0.91
PPM1DO15297 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.75■□□□□ 0.91
PPM1DO15297 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.75■□□□□ 0.91
PPM1DO15297 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.75■□□□□ 0.91
PPM1DO15297 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.75■□□□□ 0.91
PPM1DO15297 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PPM1DO15297 MFSD11-216ENST00000590393 1141 ntBASIC20.75■□□□□ 0.91
PPM1DO15297 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.75■□□□□ 0.91
PPM1DO15297 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPM1DO15297 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PPM1DO15297 AC139530.1-201ENST00000575312 1977 ntBASIC20.75■□□□□ 0.91
PPM1DO15297 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPM1DO15297 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PPM1DO15297 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.75■□□□□ 0.91
PPM1DO15297 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
PPM1DO15297 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPM1DO15297 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PPM1DO15297 AP006587.3-201ENST00000525742 1516 ntBASIC20.74■□□□□ 0.91
PPM1DO15297 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPM1DO15297 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPM1DO15297 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PPM1DO15297 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PPM1DO15297 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.74■□□□□ 0.91
PPM1DO15297 CROCCP5-201ENST00000436658 830 ntBASIC20.74■□□□□ 0.91
PPM1DO15297 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.74■□□□□ 0.91
PPM1DO15297 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
PPM1DO15297 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.74■□□□□ 0.91
PPM1DO15297 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPM1DO15297 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPM1DO15297 UBE2DNL-204ENST00000602536 740 ntBASIC20.74■□□□□ 0.91
PPM1DO15297 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PPM1DO15297 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPM1DO15297 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPM1DO15297 AL117328.2-201ENST00000624617 1940 ntBASIC20.74■□□□□ 0.91
PPM1DO15297 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPM1DO15297 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPM1DO15297 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PPM1DO15297 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPM1DO15297 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.74■□□□□ 0.91
PPM1DO15297 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms