Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CHKB-CPT1BH3BT56 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CHKB-CPT1BH3BT56 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHKB-CPT1BH3BT56 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHKB-CPT1BH3BT56 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CHKB-CPT1BH3BT56 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHKB-CPT1BH3BT56 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
CHKB-CPT1BH3BT56 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CHKB-CPT1BH3BT56 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC11.94□□□□□ -0.5
CHKB-CPT1BH3BT56 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CHKB-CPT1BH3BT56 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CHKB-CPT1BH3BT56 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CHKB-CPT1BH3BT56 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHKB-CPT1BH3BT56 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHKB-CPT1BH3BT56 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CHKB-CPT1BH3BT56 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC11.93□□□□□ -0.5
CHKB-CPT1BH3BT56 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
CHKB-CPT1BH3BT56 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHKB-CPT1BH3BT56 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHKB-CPT1BH3BT56 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHKB-CPT1BH3BT56 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHKB-CPT1BH3BT56 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CHKB-CPT1BH3BT56 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHKB-CPT1BH3BT56 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC11.93□□□□□ -0.5
CHKB-CPT1BH3BT56 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC11.93□□□□□ -0.5
CHKB-CPT1BH3BT56 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHKB-CPT1BH3BT56 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHKB-CPT1BH3BT56 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CHKB-CPT1BH3BT56 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHKB-CPT1BH3BT56 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHKB-CPT1BH3BT56 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC11.93□□□□□ -0.5
CHKB-CPT1BH3BT56 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC11.93□□□□□ -0.5
CHKB-CPT1BH3BT56 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHKB-CPT1BH3BT56 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC11.93□□□□□ -0.5
CHKB-CPT1BH3BT56 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CHKB-CPT1BH3BT56 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CHKB-CPT1BH3BT56 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHKB-CPT1BH3BT56 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CHKB-CPT1BH3BT56 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC11.92□□□□□ -0.5
CHKB-CPT1BH3BT56 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHKB-CPT1BH3BT56 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CHKB-CPT1BH3BT56 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
CHKB-CPT1BH3BT56 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC11.92□□□□□ -0.5
CHKB-CPT1BH3BT56 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
CHKB-CPT1BH3BT56 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CHKB-CPT1BH3BT56 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
CHKB-CPT1BH3BT56 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
CHKB-CPT1BH3BT56 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHKB-CPT1BH3BT56 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
CHKB-CPT1BH3BT56 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC11.92□□□□□ -0.5
CHKB-CPT1BH3BT56 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
CHKB-CPT1BH3BT56 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
CHKB-CPT1BH3BT56 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CHKB-CPT1BH3BT56 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHKB-CPT1BH3BT56 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CHKB-CPT1BH3BT56 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHKB-CPT1BH3BT56 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHKB-CPT1BH3BT56 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHKB-CPT1BH3BT56 LINC01521-201ENST00000504184 1943 ntBASIC11.92□□□□□ -0.5
CHKB-CPT1BH3BT56 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC11.91□□□□□ -0.5
CHKB-CPT1BH3BT56 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHKB-CPT1BH3BT56 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CHKB-CPT1BH3BT56 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CHKB-CPT1BH3BT56 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC11.91□□□□□ -0.5
CHKB-CPT1BH3BT56 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CHKB-CPT1BH3BT56 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHKB-CPT1BH3BT56 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
CHKB-CPT1BH3BT56 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHKB-CPT1BH3BT56 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHKB-CPT1BH3BT56 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
CHKB-CPT1BH3BT56 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHKB-CPT1BH3BT56 WAC-202ENST00000347934 2839 ntTSL 5 BASIC11.91□□□□□ -0.5
CHKB-CPT1BH3BT56 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHKB-CPT1BH3BT56 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC11.91□□□□□ -0.5
CHKB-CPT1BH3BT56 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHKB-CPT1BH3BT56 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHKB-CPT1BH3BT56 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC11.91□□□□□ -0.5
CHKB-CPT1BH3BT56 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CHKB-CPT1BH3BT56 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC11.91□□□□□ -0.5
CHKB-CPT1BH3BT56 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CHKB-CPT1BH3BT56 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
CHKB-CPT1BH3BT56 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CHKB-CPT1BH3BT56 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHKB-CPT1BH3BT56 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHKB-CPT1BH3BT56 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CHKB-CPT1BH3BT56 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHKB-CPT1BH3BT56 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CHKB-CPT1BH3BT56 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHKB-CPT1BH3BT56 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
CHKB-CPT1BH3BT56 AC242852.2-201ENST00000615738 1807 ntBASIC11.9□□□□□ -0.5
CHKB-CPT1BH3BT56 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
CHKB-CPT1BH3BT56 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC11.9□□□□□ -0.5
CHKB-CPT1BH3BT56 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CHKB-CPT1BH3BT56 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CHKB-CPT1BH3BT56 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC11.9□□□□□ -0.5
CHKB-CPT1BH3BT56 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CHKB-CPT1BH3BT56 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CHKB-CPT1BH3BT56 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CHKB-CPT1BH3BT56 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CHKB-CPT1BH3BT56 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms