Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH3D21A4FU49 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.74■□□□□ 0.75
SH3D21A4FU49 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SH3D21A4FU49 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SH3D21A4FU49 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.73■□□□□ 0.75
SH3D21A4FU49 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SH3D21A4FU49 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH3D21A4FU49 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SH3D21A4FU49 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SH3D21A4FU49 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.73■□□□□ 0.75
SH3D21A4FU49 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SH3D21A4FU49 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.73■□□□□ 0.75
SH3D21A4FU49 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SH3D21A4FU49 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH3D21A4FU49 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SH3D21A4FU49 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SH3D21A4FU49 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.73■□□□□ 0.75
SH3D21A4FU49 AC104564.3-201ENST00000582367 638 ntBASIC19.73■□□□□ 0.75
SH3D21A4FU49 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.73■□□□□ 0.75
SH3D21A4FU49 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH3D21A4FU49 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SH3D21A4FU49 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH3D21A4FU49 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SH3D21A4FU49 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SH3D21A4FU49 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH3D21A4FU49 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
SH3D21A4FU49 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH3D21A4FU49 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SH3D21A4FU49 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH3D21A4FU49 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH3D21A4FU49 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SH3D21A4FU49 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.72■□□□□ 0.75
SH3D21A4FU49 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.72■□□□□ 0.75
SH3D21A4FU49 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.72■□□□□ 0.75
SH3D21A4FU49 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH3D21A4FU49 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH3D21A4FU49 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SH3D21A4FU49 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH3D21A4FU49 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SH3D21A4FU49 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
SH3D21A4FU49 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SH3D21A4FU49 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.71■□□□□ 0.75
SH3D21A4FU49 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH3D21A4FU49 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SH3D21A4FU49 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SH3D21A4FU49 MIR3181-201ENST00000578512 73 ntBASIC19.71■□□□□ 0.75
SH3D21A4FU49 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.71■□□□□ 0.75
SH3D21A4FU49 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
SH3D21A4FU49 MIR6821-201ENST00000617625 74 ntBASIC19.71■□□□□ 0.75
SH3D21A4FU49 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SH3D21A4FU49 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.71■□□□□ 0.75
SH3D21A4FU49 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.71■□□□□ 0.75
SH3D21A4FU49 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SH3D21A4FU49 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SH3D21A4FU49 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH3D21A4FU49 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SH3D21A4FU49 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SH3D21A4FU49 IRS3P-201ENST00000223076 1006 ntBASIC19.7■□□□□ 0.74
SH3D21A4FU49 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SH3D21A4FU49 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.7■□□□□ 0.74
SH3D21A4FU49 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.7■□□□□ 0.74
SH3D21A4FU49 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
SH3D21A4FU49 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SH3D21A4FU49 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SH3D21A4FU49 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SH3D21A4FU49 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SH3D21A4FU49 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SH3D21A4FU49 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SH3D21A4FU49 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SH3D21A4FU49 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SH3D21A4FU49 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SH3D21A4FU49 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SH3D21A4FU49 AC097381.1-201ENST00000429019 1296 ntBASIC19.69■□□□□ 0.74
SH3D21A4FU49 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.69■□□□□ 0.74
SH3D21A4FU49 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.69■□□□□ 0.74
SH3D21A4FU49 AC233992.3-201ENST00000607491 485 ntBASIC19.69■□□□□ 0.74
SH3D21A4FU49 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SH3D21A4FU49 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SH3D21A4FU49 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.69■□□□□ 0.74
SH3D21A4FU49 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SH3D21A4FU49 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SH3D21A4FU49 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.68■□□□□ 0.74
SH3D21A4FU49 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SH3D21A4FU49 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SH3D21A4FU49 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SH3D21A4FU49 BX842568.3-201ENST00000418104 571 ntBASIC19.68■□□□□ 0.74
SH3D21A4FU49 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.68■□□□□ 0.74
SH3D21A4FU49 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SH3D21A4FU49 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SH3D21A4FU49 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SH3D21A4FU49 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SH3D21A4FU49 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SH3D21A4FU49 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SH3D21A4FU49 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SH3D21A4FU49 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SH3D21A4FU49 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SH3D21A4FU49 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SH3D21A4FU49 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SH3D21A4FU49 Z98882.1-201ENST00000622160 2253 ntBASIC19.67■□□□□ 0.74
SH3D21A4FU49 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms