Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
TRAV22A0A0B4J277 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
TRAV22A0A0B4J277 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRAV22A0A0B4J277 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV22A0A0B4J277 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV22A0A0B4J277 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV22A0A0B4J277 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC12.11□□□□□ -0.47
TRAV22A0A0B4J277 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV22A0A0B4J277 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV22A0A0B4J277 GOLGA2P6-201ENST00000340929 2049 ntBASIC12.11□□□□□ -0.47
TRAV22A0A0B4J277 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC12.11□□□□□ -0.47
TRAV22A0A0B4J277 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV22A0A0B4J277 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV22A0A0B4J277 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC12.11□□□□□ -0.47
TRAV22A0A0B4J277 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
TRAV22A0A0B4J277 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC12.11□□□□□ -0.47
TRAV22A0A0B4J277 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC12.11□□□□□ -0.47
TRAV22A0A0B4J277 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
TRAV22A0A0B4J277 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV22A0A0B4J277 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV22A0A0B4J277 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
TRAV22A0A0B4J277 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV22A0A0B4J277 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV22A0A0B4J277 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
TRAV22A0A0B4J277 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV22A0A0B4J277 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC12.11□□□□□ -0.47
TRAV22A0A0B4J277 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
TRAV22A0A0B4J277 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
TRAV22A0A0B4J277 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
TRAV22A0A0B4J277 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
TRAV22A0A0B4J277 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
TRAV22A0A0B4J277 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV22A0A0B4J277 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV22A0A0B4J277 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
TRAV22A0A0B4J277 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV22A0A0B4J277 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV22A0A0B4J277 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV22A0A0B4J277 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV22A0A0B4J277 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
TRAV22A0A0B4J277 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TRAV22A0A0B4J277 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV22A0A0B4J277 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV22A0A0B4J277 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC12.1□□□□□ -0.47
TRAV22A0A0B4J277 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAV22A0A0B4J277 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV22A0A0B4J277 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV22A0A0B4J277 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV22A0A0B4J277 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
TRAV22A0A0B4J277 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC12.1□□□□□ -0.47
TRAV22A0A0B4J277 TUB-203ENST00000534099 1759 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAV22A0A0B4J277 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV22A0A0B4J277 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV22A0A0B4J277 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC12.1□□□□□ -0.47
TRAV22A0A0B4J277 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV22A0A0B4J277 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
TRAV22A0A0B4J277 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV22A0A0B4J277 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV22A0A0B4J277 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV22A0A0B4J277 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC12.09□□□□□ -0.47
TRAV22A0A0B4J277 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC12.09□□□□□ -0.47
TRAV22A0A0B4J277 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV22A0A0B4J277 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV22A0A0B4J277 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV22A0A0B4J277 FEM1AP1-201ENST00000431297 1995 ntBASIC12.09□□□□□ -0.47
TRAV22A0A0B4J277 FEM1AP4-201ENST00000443167 1987 ntBASIC12.09□□□□□ -0.47
TRAV22A0A0B4J277 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV22A0A0B4J277 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV22A0A0B4J277 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV22A0A0B4J277 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
TRAV22A0A0B4J277 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC12.09□□□□□ -0.47
TRAV22A0A0B4J277 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV22A0A0B4J277 AL353803.4-201ENST00000565882 1934 ntBASIC12.09□□□□□ -0.47
TRAV22A0A0B4J277 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV22A0A0B4J277 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV22A0A0B4J277 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV22A0A0B4J277 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV22A0A0B4J277 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
TRAV22A0A0B4J277 AC090877.2-201ENST00000558441 1738 ntBASIC12.08□□□□□ -0.47
TRAV22A0A0B4J277 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
TRAV22A0A0B4J277 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV22A0A0B4J277 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV22A0A0B4J277 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
TRAV22A0A0B4J277 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV22A0A0B4J277 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV22A0A0B4J277 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV22A0A0B4J277 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV22A0A0B4J277 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV22A0A0B4J277 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV22A0A0B4J277 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV22A0A0B4J277 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
TRAV22A0A0B4J277 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC12.08□□□□□ -0.48
TRAV22A0A0B4J277 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV22A0A0B4J277 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV22A0A0B4J277 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV22A0A0B4J277 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRAV22A0A0B4J277 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC12.08□□□□□ -0.48
TRAV22A0A0B4J277 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
TRAV22A0A0B4J277 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV22A0A0B4J277 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRAV22A0A0B4J277 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms