Protein–RNA interactions for Protein: A0A075B6N1

TRBV19, T-cell receptor beta variable 19 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV19A0A075B6N1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV19A0A075B6N1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV19A0A075B6N1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV19A0A075B6N1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV19A0A075B6N1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV19A0A075B6N1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV19A0A075B6N1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
TRBV19A0A075B6N1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV19A0A075B6N1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRBV19A0A075B6N1 AC010141.3-201ENST00000456659 717 ntBASIC16.26■□□□□ 0.19
TRBV19A0A075B6N1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.26■□□□□ 0.19
TRBV19A0A075B6N1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC16.26■□□□□ 0.19
TRBV19A0A075B6N1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.26■□□□□ 0.19
TRBV19A0A075B6N1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TRBV19A0A075B6N1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV19A0A075B6N1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV19A0A075B6N1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV19A0A075B6N1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV19A0A075B6N1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.26■□□□□ 0.19
TRBV19A0A075B6N1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV19A0A075B6N1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV19A0A075B6N1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.25■□□□□ 0.19
TRBV19A0A075B6N1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV19A0A075B6N1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV19A0A075B6N1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV19A0A075B6N1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV19A0A075B6N1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV19A0A075B6N1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRBV19A0A075B6N1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV19A0A075B6N1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV19A0A075B6N1 MIR3181-201ENST00000578512 73 ntBASIC16.25■□□□□ 0.19
TRBV19A0A075B6N1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV19A0A075B6N1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.25■□□□□ 0.19
TRBV19A0A075B6N1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV19A0A075B6N1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV19A0A075B6N1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV19A0A075B6N1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRBV19A0A075B6N1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV19A0A075B6N1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV19A0A075B6N1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV19A0A075B6N1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.25■□□□□ 0.19
TRBV19A0A075B6N1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV19A0A075B6N1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.24■□□□□ 0.19
TRBV19A0A075B6N1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV19A0A075B6N1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.24■□□□□ 0.19
TRBV19A0A075B6N1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRBV19A0A075B6N1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV19A0A075B6N1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV19A0A075B6N1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV19A0A075B6N1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV19A0A075B6N1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV19A0A075B6N1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.24■□□□□ 0.19
TRBV19A0A075B6N1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV19A0A075B6N1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV19A0A075B6N1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV19A0A075B6N1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV19A0A075B6N1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV19A0A075B6N1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV19A0A075B6N1 LINC01521-201ENST00000504184 1943 ntBASIC16.23■□□□□ 0.19
TRBV19A0A075B6N1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV19A0A075B6N1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRBV19A0A075B6N1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV19A0A075B6N1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV19A0A075B6N1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.23■□□□□ 0.19
TRBV19A0A075B6N1 KRT16P3-201ENST00000439127 1283 ntBASIC16.23■□□□□ 0.19
TRBV19A0A075B6N1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV19A0A075B6N1 AL034346.1-201ENST00000568244 1277 ntBASIC16.23■□□□□ 0.19
TRBV19A0A075B6N1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TRBV19A0A075B6N1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV19A0A075B6N1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV19A0A075B6N1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV19A0A075B6N1 AL157384.1-201ENST00000445995 2473 ntBASIC16.23■□□□□ 0.19
TRBV19A0A075B6N1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.23■□□□□ 0.19
TRBV19A0A075B6N1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV19A0A075B6N1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV19A0A075B6N1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV19A0A075B6N1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV19A0A075B6N1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV19A0A075B6N1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV19A0A075B6N1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TRBV19A0A075B6N1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TRBV19A0A075B6N1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV19A0A075B6N1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV19A0A075B6N1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRBV19A0A075B6N1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV19A0A075B6N1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV19A0A075B6N1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV19A0A075B6N1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV19A0A075B6N1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV19A0A075B6N1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV19A0A075B6N1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV19A0A075B6N1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV19A0A075B6N1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.21■□□□□ 0.19
TRBV19A0A075B6N1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TRBV19A0A075B6N1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV19A0A075B6N1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRBV19A0A075B6N1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV19A0A075B6N1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV19A0A075B6N1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV19A0A075B6N1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms