Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AL590640.1-201ENST00000425205 379 ntTSL 3 BASIC12.21□□□□□ -0.45
MTHFRP42898 AL358176.5-201ENST00000442611 385 ntBASIC12.21□□□□□ -0.45
MTHFRP42898 AL359692.1-201ENST00000451069 265 ntBASIC12.21□□□□□ -0.45
MTHFRP42898 VN1R28P-201ENST00000452517 896 ntBASIC12.21□□□□□ -0.45
MTHFRP42898 AC093157.1-201ENST00000453011 794 ntTSL 3 BASIC12.21□□□□□ -0.45
MTHFRP42898 HINT1P1-201ENST00000464866 378 ntBASIC12.21□□□□□ -0.45
MTHFRP42898 RN7SL813P-201ENST00000489529 283 ntBASIC12.21□□□□□ -0.45
MTHFRP42898 CDRT1-207ENST00000583965 562 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MTHFRP42898 DAZAP2-215ENST00000604900 1045 ntTSL 3 BASIC12.21□□□□□ -0.45
MTHFRP42898 GGNBP1-206ENST00000618642 897 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MTHFRP42898 GDPD2-205ENST00000538649 2067 ntTSL 2 BASIC12.21□□□□□ -0.45
MTHFRP42898 KCNH7-201ENST00000328032 2434 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
MTHFRP42898 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
MTHFRP42898 LLGL2-205ENST00000577200 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
MTHFRP42898 VIL1-202ENST00000392114 1968 ntTSL 2 BASIC12.21□□□□□ -0.46
MTHFRP42898 AL359532.1-201ENST00000608729 1560 ntBASIC12.21□□□□□ -0.46
MTHFRP42898 PLEKHG6-204ENST00000449001 3111 ntTSL 2 BASIC12.21□□□□□ -0.46
MTHFRP42898 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
MTHFRP42898 METTL4-203ENST00000574538 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
MTHFRP42898 IQCK-202ENST00000320394 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
MTHFRP42898 OLFML3-202ENST00000369551 1934 ntTSL 2 BASIC12.21□□□□□ -0.46
MTHFRP42898 C1orf198-203ENST00000470540 3819 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
MTHFRP42898 FAM49B-215ENST00000519824 3798 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
MTHFRP42898 RAET1K-202ENST00000533735 1883 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
MTHFRP42898 NFXL1-202ENST00000381538 3728 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
MTHFRP42898 PMEL-204ENST00000548493 2204 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.46
MTHFRP42898 TNFSF13B-201ENST00000375887 2582 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
MTHFRP42898 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
MTHFRP42898 SPATA33-201ENST00000301031 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 C19orf47-208ENST00000582783 3628 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 SYS1-201ENST00000243918 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 CCAR2-206ENST00000520861 3560 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 AL591885.1-201ENST00000440494 1799 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 AL132656.4-201ENST00000623504 2122 ntBASIC12.2□□□□□ -0.46
MTHFRP42898 SLC5A9-203ENST00000438567 3195 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 DDR1-224ENST00000376567 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 VPS16-202ENST00000380445 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 CACNA2D3-AS1-201ENST00000471265 2078 ntTSL 2 BASIC12.2□□□□□ -0.46
MTHFRP42898 COL12A1-202ENST00000345356 5886 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 AKT2-201ENST00000311278 1393 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 BCDIN3D-AS1-201ENST00000548872 3078 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 TOMM40L-202ENST00000367988 2708 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
MTHFRP42898 RAI2-202ENST00000360011 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 CLDN10-203ENST00000376873 2656 ntTSL 2 BASIC12.2□□□□□ -0.46
MTHFRP42898 AC018521.1-202ENST00000641877 2655 ntBASIC12.2□□□□□ -0.46
MTHFRP42898 LRTM2-208ENST00000543818 3986 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
MTHFRP42898 ERI1-201ENST00000250263 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 FAM13C-201ENST00000422313 1963 ntTSL 5 BASIC12.2□□□□□ -0.46
MTHFRP42898 LINC00840-201ENST00000431737 1974 ntTSL 2 BASIC12.2□□□□□ -0.46
MTHFRP42898 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 PLEKHA2-209ENST00000617275 5582 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
MTHFRP42898 HERC2P9-206ENST00000529624 5187 ntBASIC12.2□□□□□ -0.46
MTHFRP42898 HKR1-204ENST00000544914 2854 ntTSL 2 BASIC12.2□□□□□ -0.46
MTHFRP42898 RPL10P2-201ENST00000310599 670 ntBASIC12.2□□□□□ -0.46
MTHFRP42898 DDB2-202ENST00000378600 717 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 DDB2-204ENST00000378603 1092 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 KRTAP4-9-201ENST00000391415 1157 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
MTHFRP42898 TGFA-203ENST00000418333 1225 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 C11orf94-201ENST00000449465 369 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
MTHFRP42898 PPP1R26-AS1-201ENST00000455039 643 ntTSL 4 BASIC12.2□□□□□ -0.46
MTHFRP42898 AC010275.1-201ENST00000504081 565 ntTSL 4 BASIC12.2□□□□□ -0.46
MTHFRP42898 LINC01033-201ENST00000504609 735 ntTSL 5 BASIC12.2□□□□□ -0.46
MTHFRP42898 LINC00499-202ENST00000507145 540 ntTSL 4 BASIC12.2□□□□□ -0.46
MTHFRP42898 AC008464.1-201ENST00000523050 663 ntTSL 3 BASIC12.2□□□□□ -0.46
MTHFRP42898 AC022239.2-201ENST00000533322 594 ntTSL 4 BASIC12.2□□□□□ -0.46
MTHFRP42898 AC091544.3-202ENST00000554246 373 ntBASIC12.2□□□□□ -0.46
MTHFRP42898 MIR4537-201ENST00000581717 70 ntBASIC12.2□□□□□ -0.46
MTHFRP42898 ITGB2-AS1-205ENST00000609694 555 ntTSL 4 BASIC12.2□□□□□ -0.46
MTHFRP42898 OR13I1P-201ENST00000609811 1264 ntBASIC12.2□□□□□ -0.46
MTHFRP42898 LINC01517-202ENST00000611112 539 ntTSL 5 BASIC12.2□□□□□ -0.46
MTHFRP42898 AC027348.1-201ENST00000615979 615 ntBASIC12.2□□□□□ -0.46
MTHFRP42898 AC006453.2-201ENST00000636531 1196 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 LRRK2-202ENST00000343742 4740 ntTSL 5 BASIC12.2□□□□□ -0.46
MTHFRP42898 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 TMEM18-201ENST00000281017 2762 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 EXOSC9-202ENST00000379663 1529 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 LIMCH1-210ENST00000509454 1506 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 ZNF493-204ENST00000594390 1536 ntTSL 2 BASIC12.2□□□□□ -0.46
MTHFRP42898 TMCO4-202ENST00000375127 2403 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 RAP1GAP-201ENST00000290101 3584 ntTSL 5 BASIC12.2□□□□□ -0.46
MTHFRP42898 MCMDC2-202ENST00000396592 2373 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 MIEF1-201ENST00000325301 5625 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 ATP13A2-201ENST00000326735 3840 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 PRPF4-202ENST00000374199 3212 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 ZNF766-202ENST00000593612 2331 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
MTHFRP42898 AC139100.1-201ENST00000588950 2035 ntTSL 2 BASIC12.2□□□□□ -0.46
MTHFRP42898 HPRT1-201ENST00000298556 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
MTHFRP42898 TSEN2-204ENST00000415684 2279 ntTSL 5 BASIC12.2□□□□□ -0.46
MTHFRP42898 OAS1-203ENST00000452357 1990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
MTHFRP42898 AC068669.1-201ENST00000623793 2228 ntBASIC12.19□□□□□ -0.46
MTHFRP42898 CLINT1-210ENST00000530742 3344 ntTSL 5 BASIC12.19□□□□□ -0.46
MTHFRP42898 RBFOX2-203ENST00000397303 1354 ntTSL 5 BASIC12.19□□□□□ -0.46
MTHFRP42898 CCT5-203ENST00000503026 1933 ntTSL 2 BASIC12.19□□□□□ -0.46
MTHFRP42898 WDR70-201ENST00000265107 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MTHFRP42898 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms