Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 SLC6A3-201ENST00000270349 3936 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04436 CAPN1-208ENST00000527323 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04436 MAGEC3-201ENST00000298296 1932 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04436 AC080112.4-201ENST00000623156 2491 ntBASIC10.66□□□□□ -0.7
P04436 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC10.66□□□□□ -0.7
P04436 COQ6-202ENST00000394026 1608 ntTSL 2 BASIC10.66□□□□□ -0.7
P04436 AC011466.4-201ENST00000623064 1614 ntBASIC10.66□□□□□ -0.7
P04436 BEND3-201ENST00000369042 6200 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
P04436 ABL2-202ENST00000367623 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04436 XPO7-202ENST00000433566 4519 ntTSL 5 BASIC10.66□□□□□ -0.7
P04436 CHMP3-201ENST00000263856 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04436 PACSIN1-201ENST00000244458 4231 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04436 PACSIN1-202ENST00000374043 4229 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P04436 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04436 SPIDR-203ENST00000517693 1848 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
P04436 ST3GAL6-228ENST00000613264 3399 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P04436 OCLN-201ENST00000355237 6438 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04436 PEX5L-201ENST00000263962 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04436 RNF13-203ENST00000392894 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04436 MARF1-205ENST00000548025 5891 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04436 YAE1D1-201ENST00000223273 899 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04436 KLK8-201ENST00000291726 853 ntTSL 5 BASIC10.66□□□□□ -0.7
P04436 IFT43-202ENST00000314067 833 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
P04436 FBXO16-201ENST00000346498 1205 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
P04436 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04436 LINC00951-201ENST00000373171 554 ntTSL 2 BASIC10.66□□□□□ -0.7
P04436 JPT2-203ENST00000382711 894 ntTSL 4 BASIC10.66□□□□□ -0.7
P04436 HDLBP-203ENST00000391975 6372 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04436 LINC02054-201ENST00000419960 885 ntTSL 3 BASIC10.66□□□□□ -0.7
P04436 C3orf18-202ENST00000422619 551 ntTSL 4 BASIC10.66□□□□□ -0.7
P04436 OR7E23P-201ENST00000435600 1048 ntBASIC10.66□□□□□ -0.7
P04436 AC011290.1-201ENST00000439751 414 ntTSL 5 BASIC10.66□□□□□ -0.7
P04436 AL353807.2-201ENST00000456382 220 ntTSL 5 BASIC10.66□□□□□ -0.7
P04436 AC084082.1-202ENST00000517961 956 ntTSL 2 BASIC10.66□□□□□ -0.7
P04436 AL117694.1-201ENST00000555136 300 ntBASIC10.66□□□□□ -0.7
P04436 AC104041.1-202ENST00000560097 566 ntTSL 4 BASIC10.66□□□□□ -0.7
P04436 AC098965.1-201ENST00000564217 967 ntBASIC10.66□□□□□ -0.7
P04436 AC008761.2-201ENST00000600512 419 ntTSL 5 BASIC10.66□□□□□ -0.7
P04436 BX255925.2-201ENST00000605600 515 ntBASIC10.66□□□□□ -0.7
P04436 AC131055.2-201ENST00000610586 248 ntBASIC10.66□□□□□ -0.7
P04436 DUXAP10-206ENST00000614614 712 ntTSL 3 BASIC10.66□□□□□ -0.7
P04436 PAX8-AS1-217ENST00000617509 627 ntTSL 4 BASIC10.66□□□□□ -0.7
P04436 AL662899.3-202ENST00000617558 991 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P04436 LYNX1-205ENST00000620006 868 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
P04436 AL160408.6-201ENST00000632063 1257 ntTSL 5 BASIC10.66□□□□□ -0.7
P04436 IFT80-201ENST00000326448 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04436 DFNB59-202ENST00000409117 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04436 CLIP1-203ENST00000361654 5568 ntTSL 5 BASIC10.66□□□□□ -0.7
P04436 RBMX-201ENST00000320676 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04436 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
P04436 AC068473.3-202ENST00000589723 4167 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P04436 DPY19L2P2-204ENST00000438364 3947 ntTSL 2 BASIC10.66□□□□□ -0.7
P04436 BCAT1-201ENST00000261192 9674 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04436 CDHR2-206ENST00000510636 4509 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04436 PCDHGB4-202ENST00000615384 4725 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
P04436 PDPN-211ENST00000617617 2808 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04436 ATP6AP1-210ENST00000619046 2823 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P04436 TNFSF13B-201ENST00000375887 2582 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04436 SEPT2-204ENST00000391973 3701 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04436 TRAF3IP3-202ENST00000367024 2331 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
P04436 BRD4-201ENST00000263377 7169 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
P04436 TGM5-201ENST00000220420 2767 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
P04436 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
P04436 ESR1-207ENST00000440973 6466 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
P04436 TGM5-205ENST00000610827 2756 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
P04436 ZNF614-201ENST00000270649 4818 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
P04436 ZNF530-201ENST00000332854 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
P04436 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
P04436 CYP4F3-206ENST00000591058 2983 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
P04436 ITGB8-205ENST00000537992 3420 ntTSL 2 BASIC10.65□□□□□ -0.7
P04436 LRRIQ4-201ENST00000340806 1827 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
P04436 TRAF3IP2-202ENST00000359831 2264 ntAPPRIS ALT1 TSL 2 BASIC10.65□□□□□ -0.7
P04436 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
P04436 NDRG4-204ENST00000394282 3626 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
P04436 CEP85-202ENST00000451429 4061 ntTSL 2 BASIC10.65□□□□□ -0.7
P04436 C1orf131-201ENST00000318906 2483 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
P04436 PRAMEF7-201ENST00000330881 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
P04436 EFNB2-201ENST00000245323 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
P04436 AC063952.1-201ENST00000637360 2666 ntTSL 3 BASIC10.65□□□□□ -0.7
P04436 LONRF2-201ENST00000393437 13912 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
P04436 EEF1GP5-201ENST00000434365 1310 ntBASIC10.65□□□□□ -0.7
P04436 EEF1GP4-201ENST00000467631 1307 ntBASIC10.65□□□□□ -0.7
P04436 ASTN1-203ENST00000367657 4187 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
P04436 TIAM2-202ENST00000318981 5916 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
P04436 STAT2-201ENST00000314128 3259 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
P04436 ENPP2-203ENST00000427067 3271 ntTSL 5 BASIC10.65□□□□□ -0.7
P04436 PLEKHA7-211ENST00000531066 4561 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
P04436 KRTAP20-2-201ENST00000330798 384 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
P04436 LDHAL6FP-201ENST00000405916 1082 ntBASIC10.65□□□□□ -0.7
P04436 HNRNPABP1-201ENST00000406003 734 ntBASIC10.65□□□□□ -0.7
P04436 CTF2P-201ENST00000412003 604 ntBASIC10.65□□□□□ -0.7
P04436 AC006450.1-201ENST00000421041 460 ntTSL 3 BASIC10.65□□□□□ -0.7
P04436 AC004980.2-201ENST00000423648 497 ntBASIC10.65□□□□□ -0.7
P04436 PRAMEF32P-201ENST00000431596 1068 ntBASIC10.65□□□□□ -0.7
P04436 AP001625.1-202ENST00000455116 450 ntTSL 3 BASIC10.65□□□□□ -0.7
P04436 OR2A1-AS1-203ENST00000468575 568 ntBASIC10.65□□□□□ -0.7
P04436 MARK3P3-201ENST00000484446 727 ntBASIC10.65□□□□□ -0.7
P04436 SPATA24-204ENST00000507779 606 ntTSL 5 BASIC10.65□□□□□ -0.7
P04436 SUB1-213ENST00000515355 771 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
P04436 ABCC6P2-201ENST00000526069 590 ntBASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms