Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.46■□□□□ 0.39
RCL1Q9Y2P8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RCL1Q9Y2P8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RCL1Q9Y2P8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RCL1Q9Y2P8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RCL1Q9Y2P8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RCL1Q9Y2P8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RCL1Q9Y2P8 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.45■□□□□ 0.38
RCL1Q9Y2P8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RCL1Q9Y2P8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.45■□□□□ 0.38
RCL1Q9Y2P8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RCL1Q9Y2P8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RCL1Q9Y2P8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RCL1Q9Y2P8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RCL1Q9Y2P8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.45■□□□□ 0.38
RCL1Q9Y2P8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RCL1Q9Y2P8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.45■□□□□ 0.38
RCL1Q9Y2P8 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.45■□□□□ 0.38
RCL1Q9Y2P8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RCL1Q9Y2P8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RCL1Q9Y2P8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RCL1Q9Y2P8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.45■□□□□ 0.38
RCL1Q9Y2P8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RCL1Q9Y2P8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RCL1Q9Y2P8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RCL1Q9Y2P8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RCL1Q9Y2P8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RCL1Q9Y2P8 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RCL1Q9Y2P8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RCL1Q9Y2P8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.44■□□□□ 0.38
RCL1Q9Y2P8 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
RCL1Q9Y2P8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RCL1Q9Y2P8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RCL1Q9Y2P8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC17.44■□□□□ 0.38
RCL1Q9Y2P8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.44■□□□□ 0.38
RCL1Q9Y2P8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.44■□□□□ 0.38
RCL1Q9Y2P8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RCL1Q9Y2P8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RCL1Q9Y2P8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RCL1Q9Y2P8 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RCL1Q9Y2P8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RCL1Q9Y2P8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.44■□□□□ 0.38
RCL1Q9Y2P8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.44■□□□□ 0.38
RCL1Q9Y2P8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RCL1Q9Y2P8 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RCL1Q9Y2P8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RCL1Q9Y2P8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RCL1Q9Y2P8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.43■□□□□ 0.38
RCL1Q9Y2P8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RCL1Q9Y2P8 AC104564.3-201ENST00000582367 638 ntBASIC17.43■□□□□ 0.38
RCL1Q9Y2P8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RCL1Q9Y2P8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RCL1Q9Y2P8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RCL1Q9Y2P8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.42■□□□□ 0.38
RCL1Q9Y2P8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RCL1Q9Y2P8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RCL1Q9Y2P8 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
RCL1Q9Y2P8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RCL1Q9Y2P8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RCL1Q9Y2P8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.42■□□□□ 0.38
RCL1Q9Y2P8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.42■□□□□ 0.38
RCL1Q9Y2P8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RCL1Q9Y2P8 AC026471.6-201ENST00000622954 1905 ntBASIC17.42■□□□□ 0.38
RCL1Q9Y2P8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RCL1Q9Y2P8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RCL1Q9Y2P8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.42■□□□□ 0.38
RCL1Q9Y2P8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.42■□□□□ 0.38
RCL1Q9Y2P8 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RCL1Q9Y2P8 FEM1AP1-201ENST00000431297 1995 ntBASIC17.42■□□□□ 0.38
RCL1Q9Y2P8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RCL1Q9Y2P8 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RCL1Q9Y2P8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RCL1Q9Y2P8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RCL1Q9Y2P8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RCL1Q9Y2P8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.41■□□□□ 0.38
RCL1Q9Y2P8 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RCL1Q9Y2P8 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
RCL1Q9Y2P8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RCL1Q9Y2P8 DUX4L18-201ENST00000553347 1267 ntBASIC17.41■□□□□ 0.38
RCL1Q9Y2P8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RCL1Q9Y2P8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RCL1Q9Y2P8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
RCL1Q9Y2P8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RCL1Q9Y2P8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RCL1Q9Y2P8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.4■□□□□ 0.38
RCL1Q9Y2P8 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RCL1Q9Y2P8 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RCL1Q9Y2P8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RCL1Q9Y2P8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RCL1Q9Y2P8 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RCL1Q9Y2P8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.4■□□□□ 0.38
RCL1Q9Y2P8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RCL1Q9Y2P8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RCL1Q9Y2P8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.4■□□□□ 0.38
RCL1Q9Y2P8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RCL1Q9Y2P8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.4■□□□□ 0.38
RCL1Q9Y2P8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RCL1Q9Y2P8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RCL1Q9Y2P8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RCL1Q9Y2P8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms