Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KCNIP1Q9NZI2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.93■□□□□ 0.46
KCNIP1Q9NZI2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KCNIP1Q9NZI2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
KCNIP1Q9NZI2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.93■□□□□ 0.46
KCNIP1Q9NZI2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.93■□□□□ 0.46
KCNIP1Q9NZI2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
KCNIP1Q9NZI2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KCNIP1Q9NZI2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KCNIP1Q9NZI2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KCNIP1Q9NZI2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.93■□□□□ 0.46
KCNIP1Q9NZI2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KCNIP1Q9NZI2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.93■□□□□ 0.46
KCNIP1Q9NZI2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.93■□□□□ 0.46
KCNIP1Q9NZI2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KCNIP1Q9NZI2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KCNIP1Q9NZI2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.93■□□□□ 0.46
KCNIP1Q9NZI2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
KCNIP1Q9NZI2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
KCNIP1Q9NZI2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
KCNIP1Q9NZI2 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.93■□□□□ 0.46
KCNIP1Q9NZI2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KCNIP1Q9NZI2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.92■□□□□ 0.46
KCNIP1Q9NZI2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KCNIP1Q9NZI2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KCNIP1Q9NZI2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.92■□□□□ 0.46
KCNIP1Q9NZI2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
KCNIP1Q9NZI2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
KCNIP1Q9NZI2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
KCNIP1Q9NZI2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.92■□□□□ 0.46
KCNIP1Q9NZI2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.92■□□□□ 0.46
KCNIP1Q9NZI2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
KCNIP1Q9NZI2 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KCNIP1Q9NZI2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KCNIP1Q9NZI2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.92■□□□□ 0.46
KCNIP1Q9NZI2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KCNIP1Q9NZI2 AC244015.2-201ENST00000616358 1861 ntBASIC17.92■□□□□ 0.46
KCNIP1Q9NZI2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KCNIP1Q9NZI2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KCNIP1Q9NZI2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KCNIP1Q9NZI2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KCNIP1Q9NZI2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KCNIP1Q9NZI2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
KCNIP1Q9NZI2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KCNIP1Q9NZI2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
KCNIP1Q9NZI2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KCNIP1Q9NZI2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
KCNIP1Q9NZI2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KCNIP1Q9NZI2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KCNIP1Q9NZI2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KCNIP1Q9NZI2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KCNIP1Q9NZI2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.91■□□□□ 0.46
KCNIP1Q9NZI2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KCNIP1Q9NZI2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
KCNIP1Q9NZI2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KCNIP1Q9NZI2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KCNIP1Q9NZI2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KCNIP1Q9NZI2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KCNIP1Q9NZI2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
KCNIP1Q9NZI2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KCNIP1Q9NZI2 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KCNIP1Q9NZI2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KCNIP1Q9NZI2 AC104564.3-201ENST00000582367 638 ntBASIC17.9■□□□□ 0.46
KCNIP1Q9NZI2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.9■□□□□ 0.46
KCNIP1Q9NZI2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KCNIP1Q9NZI2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KCNIP1Q9NZI2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
KCNIP1Q9NZI2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
KCNIP1Q9NZI2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KCNIP1Q9NZI2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KCNIP1Q9NZI2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.89■□□□□ 0.45
KCNIP1Q9NZI2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.89■□□□□ 0.45
KCNIP1Q9NZI2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
KCNIP1Q9NZI2 SERBP1P1-201ENST00000396021 1160 ntBASIC17.89■□□□□ 0.45
KCNIP1Q9NZI2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
KCNIP1Q9NZI2 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.89■□□□□ 0.45
KCNIP1Q9NZI2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.89■□□□□ 0.45
KCNIP1Q9NZI2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
KCNIP1Q9NZI2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
KCNIP1Q9NZI2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KCNIP1Q9NZI2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KCNIP1Q9NZI2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
KCNIP1Q9NZI2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KCNIP1Q9NZI2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.89■□□□□ 0.45
KCNIP1Q9NZI2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
KCNIP1Q9NZI2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.89■□□□□ 0.45
KCNIP1Q9NZI2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KCNIP1Q9NZI2 OXCT2P1-201ENST00000447263 1535 ntBASIC17.88■□□□□ 0.45
KCNIP1Q9NZI2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.88■□□□□ 0.45
KCNIP1Q9NZI2 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
KCNIP1Q9NZI2 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
KCNIP1Q9NZI2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.88■□□□□ 0.45
KCNIP1Q9NZI2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
KCNIP1Q9NZI2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KCNIP1Q9NZI2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KCNIP1Q9NZI2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.88■□□□□ 0.45
KCNIP1Q9NZI2 AL034346.1-201ENST00000568244 1277 ntBASIC17.88■□□□□ 0.45
KCNIP1Q9NZI2 AC011298.3-201ENST00000615796 283 ntBASIC17.88■□□□□ 0.45
KCNIP1Q9NZI2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
KCNIP1Q9NZI2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms