Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CYSTM1Q9H1C7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CYSTM1Q9H1C7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
CYSTM1Q9H1C7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CYSTM1Q9H1C7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CYSTM1Q9H1C7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CYSTM1Q9H1C7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CYSTM1Q9H1C7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CYSTM1Q9H1C7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CYSTM1Q9H1C7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CYSTM1Q9H1C7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CYSTM1Q9H1C7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CYSTM1Q9H1C7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC12.58□□□□□ -0.4
CYSTM1Q9H1C7 Z98882.1-201ENST00000622160 2253 ntBASIC12.58□□□□□ -0.4
CYSTM1Q9H1C7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CYSTM1Q9H1C7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC12.57□□□□□ -0.4
CYSTM1Q9H1C7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CYSTM1Q9H1C7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CYSTM1Q9H1C7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC12.57□□□□□ -0.4
CYSTM1Q9H1C7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC12.57□□□□□ -0.4
CYSTM1Q9H1C7 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC12.57□□□□□ -0.4
CYSTM1Q9H1C7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CYSTM1Q9H1C7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CYSTM1Q9H1C7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC12.57□□□□□ -0.4
CYSTM1Q9H1C7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CYSTM1Q9H1C7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CYSTM1Q9H1C7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CYSTM1Q9H1C7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CYSTM1Q9H1C7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CYSTM1Q9H1C7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CYSTM1Q9H1C7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CYSTM1Q9H1C7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC12.57□□□□□ -0.4
CYSTM1Q9H1C7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CYSTM1Q9H1C7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CYSTM1Q9H1C7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CYSTM1Q9H1C7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CYSTM1Q9H1C7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC12.57□□□□□ -0.4
CYSTM1Q9H1C7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CYSTM1Q9H1C7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CYSTM1Q9H1C7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CYSTM1Q9H1C7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CYSTM1Q9H1C7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CYSTM1Q9H1C7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CYSTM1Q9H1C7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CYSTM1Q9H1C7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CYSTM1Q9H1C7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CYSTM1Q9H1C7 WASH5P-204ENST00000632292 975 ntBASIC12.56□□□□□ -0.4
CYSTM1Q9H1C7 GABARAPL3-202ENST00000624044 1851 ntBASIC12.56□□□□□ -0.4
CYSTM1Q9H1C7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CYSTM1Q9H1C7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CYSTM1Q9H1C7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CYSTM1Q9H1C7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CYSTM1Q9H1C7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CYSTM1Q9H1C7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
CYSTM1Q9H1C7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CYSTM1Q9H1C7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC12.56□□□□□ -0.4
CYSTM1Q9H1C7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
CYSTM1Q9H1C7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CYSTM1Q9H1C7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CYSTM1Q9H1C7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CYSTM1Q9H1C7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CYSTM1Q9H1C7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC12.55□□□□□ -0.4
CYSTM1Q9H1C7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC12.55□□□□□ -0.4
CYSTM1Q9H1C7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC12.55□□□□□ -0.4
CYSTM1Q9H1C7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
CYSTM1Q9H1C7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CYSTM1Q9H1C7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CYSTM1Q9H1C7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CYSTM1Q9H1C7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC12.55□□□□□ -0.4
CYSTM1Q9H1C7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC12.55□□□□□ -0.4
CYSTM1Q9H1C7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CYSTM1Q9H1C7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CYSTM1Q9H1C7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CYSTM1Q9H1C7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CYSTM1Q9H1C7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
CYSTM1Q9H1C7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CYSTM1Q9H1C7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CYSTM1Q9H1C7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CYSTM1Q9H1C7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CYSTM1Q9H1C7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CYSTM1Q9H1C7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
CYSTM1Q9H1C7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CYSTM1Q9H1C7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
CYSTM1Q9H1C7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CYSTM1Q9H1C7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CYSTM1Q9H1C7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CYSTM1Q9H1C7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CYSTM1Q9H1C7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC12.54□□□□□ -0.4
CYSTM1Q9H1C7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CYSTM1Q9H1C7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CYSTM1Q9H1C7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC12.53□□□□□ -0.4
CYSTM1Q9H1C7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CYSTM1Q9H1C7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CYSTM1Q9H1C7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC12.53□□□□□ -0.4
CYSTM1Q9H1C7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC12.53□□□□□ -0.4
CYSTM1Q9H1C7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CYSTM1Q9H1C7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CYSTM1Q9H1C7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CYSTM1Q9H1C7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC12.53□□□□□ -0.4
CYSTM1Q9H1C7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms