Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NR1H4Q96RI1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NR1H4Q96RI1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
NR1H4Q96RI1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.13■□□□□ 0.81
NR1H4Q96RI1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NR1H4Q96RI1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NR1H4Q96RI1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
NR1H4Q96RI1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NR1H4Q96RI1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
NR1H4Q96RI1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
NR1H4Q96RI1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.13■□□□□ 0.81
NR1H4Q96RI1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.13■□□□□ 0.81
NR1H4Q96RI1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NR1H4Q96RI1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
NR1H4Q96RI1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NR1H4Q96RI1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NR1H4Q96RI1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NR1H4Q96RI1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.12■□□□□ 0.81
NR1H4Q96RI1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
NR1H4Q96RI1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
NR1H4Q96RI1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NR1H4Q96RI1 AC018445.3-201ENST00000624177 1945 ntBASIC20.12■□□□□ 0.81
NR1H4Q96RI1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
NR1H4Q96RI1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NR1H4Q96RI1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NR1H4Q96RI1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NR1H4Q96RI1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NR1H4Q96RI1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
NR1H4Q96RI1 RP9P-202ENST00000450133 1212 ntBASIC20.12■□□□□ 0.81
NR1H4Q96RI1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
NR1H4Q96RI1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
NR1H4Q96RI1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.12■□□□□ 0.81
NR1H4Q96RI1 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
NR1H4Q96RI1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NR1H4Q96RI1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NR1H4Q96RI1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NR1H4Q96RI1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.12■□□□□ 0.81
NR1H4Q96RI1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NR1H4Q96RI1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NR1H4Q96RI1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NR1H4Q96RI1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NR1H4Q96RI1 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.11■□□□□ 0.81
NR1H4Q96RI1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.11■□□□□ 0.81
NR1H4Q96RI1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
NR1H4Q96RI1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
NR1H4Q96RI1 AC093536.1-201ENST00000569153 554 ntBASIC20.11■□□□□ 0.81
NR1H4Q96RI1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NR1H4Q96RI1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NR1H4Q96RI1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NR1H4Q96RI1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NR1H4Q96RI1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NR1H4Q96RI1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NR1H4Q96RI1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NR1H4Q96RI1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.1■□□□□ 0.81
NR1H4Q96RI1 AP005212.1-201ENST00000581547 1997 ntBASIC20.1■□□□□ 0.81
NR1H4Q96RI1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NR1H4Q96RI1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.1■□□□□ 0.81
NR1H4Q96RI1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
NR1H4Q96RI1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NR1H4Q96RI1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.1■□□□□ 0.81
NR1H4Q96RI1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NR1H4Q96RI1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NR1H4Q96RI1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NR1H4Q96RI1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
NR1H4Q96RI1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
NR1H4Q96RI1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
NR1H4Q96RI1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
NR1H4Q96RI1 SMG8-203ENST00000578922 2178 ntBASIC20.1■□□□□ 0.81
NR1H4Q96RI1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NR1H4Q96RI1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NR1H4Q96RI1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.09■□□□□ 0.81
NR1H4Q96RI1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
NR1H4Q96RI1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.09■□□□□ 0.81
NR1H4Q96RI1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.09■□□□□ 0.81
NR1H4Q96RI1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
NR1H4Q96RI1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.09■□□□□ 0.81
NR1H4Q96RI1 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NR1H4Q96RI1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NR1H4Q96RI1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.09■□□□□ 0.81
NR1H4Q96RI1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.09■□□□□ 0.81
NR1H4Q96RI1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.09■□□□□ 0.81
NR1H4Q96RI1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NR1H4Q96RI1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NR1H4Q96RI1 OXCT2P1-201ENST00000447263 1535 ntBASIC20.08■□□□□ 0.81
NR1H4Q96RI1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NR1H4Q96RI1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
NR1H4Q96RI1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
NR1H4Q96RI1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NR1H4Q96RI1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.08■□□□□ 0.81
NR1H4Q96RI1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.08■□□□□ 0.81
NR1H4Q96RI1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.08■□□□□ 0.81
NR1H4Q96RI1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.08■□□□□ 0.8
NR1H4Q96RI1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.08■□□□□ 0.8
NR1H4Q96RI1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
NR1H4Q96RI1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
NR1H4Q96RI1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NR1H4Q96RI1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NR1H4Q96RI1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
NR1H4Q96RI1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.08■□□□□ 0.8
NR1H4Q96RI1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms