Protein–RNA interactions for Protein: Q96H20

SNF8, Vacuolar-sorting protein SNF8, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8Q96H20 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SNF8Q96H20 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SNF8Q96H20 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.98■■□□□ 1.11
SNF8Q96H20 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SNF8Q96H20 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SNF8Q96H20 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SNF8Q96H20 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SNF8Q96H20 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
SNF8Q96H20 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SNF8Q96H20 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.97■■□□□ 1.11
SNF8Q96H20 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.97■■□□□ 1.11
SNF8Q96H20 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.97■■□□□ 1.11
SNF8Q96H20 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.97■■□□□ 1.11
SNF8Q96H20 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SNF8Q96H20 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.97■■□□□ 1.11
SNF8Q96H20 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNF8Q96H20 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNF8Q96H20 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SNF8Q96H20 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.96■■□□□ 1.11
SNF8Q96H20 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNF8Q96H20 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.96■■□□□ 1.11
SNF8Q96H20 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNF8Q96H20 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNF8Q96H20 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
SNF8Q96H20 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.96■■□□□ 1.11
SNF8Q96H20 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.96■■□□□ 1.11
SNF8Q96H20 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.96■■□□□ 1.11
SNF8Q96H20 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNF8Q96H20 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNF8Q96H20 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNF8Q96H20 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.96■■□□□ 1.11
SNF8Q96H20 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNF8Q96H20 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNF8Q96H20 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.96■■□□□ 1.11
SNF8Q96H20 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SNF8Q96H20 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.96■■□□□ 1.11
SNF8Q96H20 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNF8Q96H20 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.96■■□□□ 1.11
SNF8Q96H20 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNF8Q96H20 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.95■■□□□ 1.1
SNF8Q96H20 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNF8Q96H20 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.95■■□□□ 1.1
SNF8Q96H20 AC087239.1-201ENST00000622671 572 ntBASIC21.95■■□□□ 1.1
SNF8Q96H20 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNF8Q96H20 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNF8Q96H20 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNF8Q96H20 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.95■■□□□ 1.1
SNF8Q96H20 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNF8Q96H20 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SNF8Q96H20 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.95■■□□□ 1.1
SNF8Q96H20 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNF8Q96H20 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.94■■□□□ 1.1
SNF8Q96H20 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SNF8Q96H20 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SNF8Q96H20 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
SNF8Q96H20 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SNF8Q96H20 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.94■■□□□ 1.1
SNF8Q96H20 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.94■■□□□ 1.1
SNF8Q96H20 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.94■■□□□ 1.1
SNF8Q96H20 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.94■■□□□ 1.1
SNF8Q96H20 AC099791.2-201ENST00000605725 427 ntBASIC21.94■■□□□ 1.1
SNF8Q96H20 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.94■■□□□ 1.1
SNF8Q96H20 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNF8Q96H20 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.94■■□□□ 1.1
SNF8Q96H20 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNF8Q96H20 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.94■■□□□ 1.1
SNF8Q96H20 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNF8Q96H20 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNF8Q96H20 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SNF8Q96H20 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNF8Q96H20 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
SNF8Q96H20 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SNF8Q96H20 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SNF8Q96H20 AL157384.1-201ENST00000445995 2473 ntBASIC21.93■■□□□ 1.1
SNF8Q96H20 OR2I1P-207ENST00000453522 948 ntBASIC21.93■■□□□ 1.1
SNF8Q96H20 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.93■■□□□ 1.1
SNF8Q96H20 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.93■■□□□ 1.1
SNF8Q96H20 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SNF8Q96H20 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SNF8Q96H20 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.93■■□□□ 1.1
SNF8Q96H20 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
SNF8Q96H20 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.92■■□□□ 1.1
SNF8Q96H20 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.92■■□□□ 1.1
SNF8Q96H20 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.92■■□□□ 1.1
SNF8Q96H20 OXCT2P1-201ENST00000447263 1535 ntBASIC21.92■■□□□ 1.1
SNF8Q96H20 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.92■■□□□ 1.1
SNF8Q96H20 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SNF8Q96H20 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SNF8Q96H20 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SNF8Q96H20 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SNF8Q96H20 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.92■■□□□ 1.1
SNF8Q96H20 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SNF8Q96H20 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.92■■□□□ 1.1
SNF8Q96H20 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SNF8Q96H20 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SNF8Q96H20 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SNF8Q96H20 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SNF8Q96H20 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.91■■□□□ 1.1
SNF8Q96H20 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.91■■□□□ 1.1
SNF8Q96H20 AC010141.3-201ENST00000456659 717 ntBASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms