Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TRIM11Q96F44 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.64■■□□□ 1.21
TRIM11Q96F44 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TRIM11Q96F44 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
TRIM11Q96F44 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
TRIM11Q96F44 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.64■■□□□ 1.21
TRIM11Q96F44 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
TRIM11Q96F44 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.63■■□□□ 1.21
TRIM11Q96F44 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM11Q96F44 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM11Q96F44 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
TRIM11Q96F44 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.63■■□□□ 1.21
TRIM11Q96F44 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM11Q96F44 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM11Q96F44 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM11Q96F44 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.63■■□□□ 1.21
TRIM11Q96F44 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.63■■□□□ 1.21
TRIM11Q96F44 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.63■■□□□ 1.21
TRIM11Q96F44 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.63■■□□□ 1.21
TRIM11Q96F44 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM11Q96F44 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.62■■□□□ 1.21
TRIM11Q96F44 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.62■■□□□ 1.21
TRIM11Q96F44 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.62■■□□□ 1.21
TRIM11Q96F44 Z98882.1-201ENST00000622160 2253 ntBASIC22.62■■□□□ 1.21
TRIM11Q96F44 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
TRIM11Q96F44 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.62■■□□□ 1.21
TRIM11Q96F44 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM11Q96F44 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.61■■□□□ 1.21
TRIM11Q96F44 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM11Q96F44 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM11Q96F44 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.61■■□□□ 1.21
TRIM11Q96F44 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM11Q96F44 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM11Q96F44 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM11Q96F44 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM11Q96F44 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM11Q96F44 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
TRIM11Q96F44 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM11Q96F44 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.61■■□□□ 1.21
TRIM11Q96F44 AC133561.4-201ENST00000566112 224 ntBASIC22.61■■□□□ 1.21
TRIM11Q96F44 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM11Q96F44 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM11Q96F44 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
TRIM11Q96F44 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.6■■□□□ 1.21
TRIM11Q96F44 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.6■■□□□ 1.21
TRIM11Q96F44 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM11Q96F44 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.6■■□□□ 1.21
TRIM11Q96F44 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
TRIM11Q96F44 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM11Q96F44 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.6■■□□□ 1.21
TRIM11Q96F44 AC126544.1-201ENST00000580842 1059 ntBASIC22.6■■□□□ 1.21
TRIM11Q96F44 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM11Q96F44 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM11Q96F44 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
TRIM11Q96F44 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.6■■□□□ 1.21
TRIM11Q96F44 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.6■■□□□ 1.21
TRIM11Q96F44 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM11Q96F44 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.59■■□□□ 1.21
TRIM11Q96F44 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM11Q96F44 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.59■■□□□ 1.21
TRIM11Q96F44 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM11Q96F44 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.59■■□□□ 1.21
TRIM11Q96F44 IGHV3-19-201ENST00000521488 291 ntBASIC22.59■■□□□ 1.21
TRIM11Q96F44 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.59■■□□□ 1.21
TRIM11Q96F44 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM11Q96F44 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.59■■□□□ 1.21
TRIM11Q96F44 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM11Q96F44 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
TRIM11Q96F44 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM11Q96F44 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM11Q96F44 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.58■■□□□ 1.21
TRIM11Q96F44 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.58■■□□□ 1.21
TRIM11Q96F44 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
TRIM11Q96F44 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.58■■□□□ 1.21
TRIM11Q96F44 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.58■■□□□ 1.21
TRIM11Q96F44 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.58■■□□□ 1.21
TRIM11Q96F44 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.58■■□□□ 1.21
TRIM11Q96F44 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM11Q96F44 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
TRIM11Q96F44 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
TRIM11Q96F44 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
TRIM11Q96F44 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
TRIM11Q96F44 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM11Q96F44 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM11Q96F44 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.57■■□□□ 1.2
TRIM11Q96F44 SMUG1P1-201ENST00000590640 811 ntBASIC22.57■■□□□ 1.2
TRIM11Q96F44 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM11Q96F44 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.57■■□□□ 1.2
TRIM11Q96F44 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM11Q96F44 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
TRIM11Q96F44 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.57■■□□□ 1.2
TRIM11Q96F44 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.57■■□□□ 1.2
TRIM11Q96F44 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM11Q96F44 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM11Q96F44 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
TRIM11Q96F44 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM11Q96F44 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.56■■□□□ 1.2
TRIM11Q96F44 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM11Q96F44 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM11Q96F44 AC027682.1-201ENST00000562846 899 ntBASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms