Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
CHD1LQ86WJ1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CHD1LQ86WJ1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CHD1LQ86WJ1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC26.49■■□□□ 1.83
CHD1LQ86WJ1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CHD1LQ86WJ1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CHD1LQ86WJ1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CHD1LQ86WJ1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CHD1LQ86WJ1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC26.49■■□□□ 1.83
CHD1LQ86WJ1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
CHD1LQ86WJ1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC26.48■■□□□ 1.83
CHD1LQ86WJ1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHD1LQ86WJ1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC26.48■■□□□ 1.83
CHD1LQ86WJ1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHD1LQ86WJ1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHD1LQ86WJ1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
CHD1LQ86WJ1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC26.48■■□□□ 1.83
CHD1LQ86WJ1 AC096631.2-201ENST00000436136 790 ntBASIC26.48■■□□□ 1.83
CHD1LQ86WJ1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CHD1LQ86WJ1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC26.48■■□□□ 1.83
CHD1LQ86WJ1 AC104564.3-201ENST00000582367 638 ntBASIC26.48■■□□□ 1.83
CHD1LQ86WJ1 SMUG1P1-201ENST00000590640 811 ntBASIC26.48■■□□□ 1.83
CHD1LQ86WJ1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHD1LQ86WJ1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC26.48■■□□□ 1.83
CHD1LQ86WJ1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHD1LQ86WJ1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC26.47■■□□□ 1.83
CHD1LQ86WJ1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CHD1LQ86WJ1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CHD1LQ86WJ1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CHD1LQ86WJ1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC26.47■■□□□ 1.83
CHD1LQ86WJ1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CHD1LQ86WJ1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CHD1LQ86WJ1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CHD1LQ86WJ1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
CHD1LQ86WJ1 AC003102.1-202ENST00000563394 1796 ntBASIC26.47■■□□□ 1.83
CHD1LQ86WJ1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC26.46■■□□□ 1.83
CHD1LQ86WJ1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC26.46■■□□□ 1.83
CHD1LQ86WJ1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CHD1LQ86WJ1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC26.46■■□□□ 1.83
CHD1LQ86WJ1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHD1LQ86WJ1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC26.46■■□□□ 1.83
CHD1LQ86WJ1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CHD1LQ86WJ1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CHD1LQ86WJ1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHD1LQ86WJ1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC26.46■■□□□ 1.83
CHD1LQ86WJ1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CHD1LQ86WJ1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHD1LQ86WJ1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHD1LQ86WJ1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHD1LQ86WJ1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
CHD1LQ86WJ1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
CHD1LQ86WJ1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.83
CHD1LQ86WJ1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
CHD1LQ86WJ1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
CHD1LQ86WJ1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC26.45■■□□□ 1.83
CHD1LQ86WJ1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC26.45■■□□□ 1.82
CHD1LQ86WJ1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC26.45■■□□□ 1.82
CHD1LQ86WJ1 AC126544.1-201ENST00000580842 1059 ntBASIC26.45■■□□□ 1.82
CHD1LQ86WJ1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CHD1LQ86WJ1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHD1LQ86WJ1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHD1LQ86WJ1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC26.44■■□□□ 1.82
CHD1LQ86WJ1 PBX2P1-201ENST00000493219 1291 ntBASIC26.44■■□□□ 1.82
CHD1LQ86WJ1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC26.44■■□□□ 1.82
CHD1LQ86WJ1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC26.44■■□□□ 1.82
CHD1LQ86WJ1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
CHD1LQ86WJ1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC26.44■■□□□ 1.82
CHD1LQ86WJ1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC26.44■■□□□ 1.82
CHD1LQ86WJ1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC26.44■■□□□ 1.82
CHD1LQ86WJ1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHD1LQ86WJ1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHD1LQ86WJ1 FEM1AP4-201ENST00000443167 1987 ntBASIC26.44■■□□□ 1.82
CHD1LQ86WJ1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHD1LQ86WJ1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC26.43■■□□□ 1.82
CHD1LQ86WJ1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
CHD1LQ86WJ1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC26.43■■□□□ 1.82
CHD1LQ86WJ1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
CHD1LQ86WJ1 IGHV3-19-201ENST00000521488 291 ntBASIC26.43■■□□□ 1.82
CHD1LQ86WJ1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC26.43■■□□□ 1.82
CHD1LQ86WJ1 AC008764.7-201ENST00000593779 1081 ntBASIC26.43■■□□□ 1.82
CHD1LQ86WJ1 AC106739.1-201ENST00000617035 715 ntBASIC26.43■■□□□ 1.82
CHD1LQ86WJ1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
CHD1LQ86WJ1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
CHD1LQ86WJ1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CHD1LQ86WJ1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
CHD1LQ86WJ1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CHD1LQ86WJ1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC26.42■■□□□ 1.82
CHD1LQ86WJ1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC26.42■■□□□ 1.82
CHD1LQ86WJ1 AF106564.1-201ENST00000607058 2553 ntBASIC26.42■■□□□ 1.82
CHD1LQ86WJ1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHD1LQ86WJ1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CHD1LQ86WJ1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CHD1LQ86WJ1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHD1LQ86WJ1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHD1LQ86WJ1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC26.42■■□□□ 1.82
CHD1LQ86WJ1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHD1LQ86WJ1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CHD1LQ86WJ1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC26.41■■□□□ 1.82
CHD1LQ86WJ1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHD1LQ86WJ1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms