Protein–RNA interactions for Protein: Q7Z614

SNX20, Sorting nexin-20, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20Q7Z614 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNX20Q7Z614 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNX20Q7Z614 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.29■■□□□ 1
SNX20Q7Z614 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.29■■□□□ 1
SNX20Q7Z614 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.29■■□□□ 1
SNX20Q7Z614 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.29■■□□□ 1
SNX20Q7Z614 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.29■■□□□ 1
SNX20Q7Z614 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.29■■□□□ 1
SNX20Q7Z614 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SNX20Q7Z614 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SNX20Q7Z614 AP006587.3-201ENST00000525742 1516 ntBASIC21.29■■□□□ 1
SNX20Q7Z614 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNX20Q7Z614 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
SNX20Q7Z614 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.28■■□□□ 1
SNX20Q7Z614 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.28■■□□□ 1
SNX20Q7Z614 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.28■■□□□ 1
SNX20Q7Z614 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SNX20Q7Z614 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.28■■□□□ 1
SNX20Q7Z614 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNX20Q7Z614 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.28■■□□□ 1
SNX20Q7Z614 MIR6084-201ENST00000622012 110 ntBASIC21.28■■□□□ 1
SNX20Q7Z614 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.28■■□□□ 1
SNX20Q7Z614 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.28■■□□□ 1
SNX20Q7Z614 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.28■■□□□ 1
SNX20Q7Z614 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNX20Q7Z614 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNX20Q7Z614 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
SNX20Q7Z614 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNX20Q7Z614 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SNX20Q7Z614 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.27■■□□□ 1
SNX20Q7Z614 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.27■■□□□ 1
SNX20Q7Z614 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SNX20Q7Z614 LINC00565-201ENST00000562710 2331 ntBASIC21.27■■□□□ 1
SNX20Q7Z614 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SNX20Q7Z614 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.27■■□□□ 1
SNX20Q7Z614 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SNX20Q7Z614 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
SNX20Q7Z614 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.27■■□□□ 1
SNX20Q7Z614 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.27■■□□□ 1
SNX20Q7Z614 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.27■■□□□ 1
SNX20Q7Z614 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.27■■□□□ 1
SNX20Q7Z614 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
SNX20Q7Z614 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.27■■□□□ 1
SNX20Q7Z614 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.27■■□□□ 1
SNX20Q7Z614 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SNX20Q7Z614 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SNX20Q7Z614 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SNX20Q7Z614 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNX20Q7Z614 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SNX20Q7Z614 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SNX20Q7Z614 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNX20Q7Z614 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.26■□□□□ 0.99
SNX20Q7Z614 AC026471.6-201ENST00000622954 1905 ntBASIC21.26■□□□□ 0.99
SNX20Q7Z614 AC005224.4-201ENST00000583262 1652 ntBASIC21.26■□□□□ 0.99
SNX20Q7Z614 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.26■□□□□ 0.99
SNX20Q7Z614 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.26■□□□□ 0.99
SNX20Q7Z614 AC027612.3-201ENST00000413684 1047 ntBASIC21.26■□□□□ 0.99
SNX20Q7Z614 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.26■□□□□ 0.99
SNX20Q7Z614 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.26■□□□□ 0.99
SNX20Q7Z614 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNX20Q7Z614 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNX20Q7Z614 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNX20Q7Z614 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNX20Q7Z614 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SNX20Q7Z614 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.25■□□□□ 0.99
SNX20Q7Z614 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNX20Q7Z614 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.25■□□□□ 0.99
SNX20Q7Z614 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNX20Q7Z614 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNX20Q7Z614 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNX20Q7Z614 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SNX20Q7Z614 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
SNX20Q7Z614 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.25■□□□□ 0.99
SNX20Q7Z614 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SNX20Q7Z614 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SNX20Q7Z614 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.24■□□□□ 0.99
SNX20Q7Z614 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SNX20Q7Z614 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.24■□□□□ 0.99
SNX20Q7Z614 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNX20Q7Z614 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.24■□□□□ 0.99
SNX20Q7Z614 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNX20Q7Z614 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SNX20Q7Z614 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SNX20Q7Z614 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SNX20Q7Z614 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SNX20Q7Z614 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.24■□□□□ 0.99
SNX20Q7Z614 TPRG1LP1-201ENST00000598702 760 ntBASIC21.24■□□□□ 0.99
SNX20Q7Z614 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.24■□□□□ 0.99
SNX20Q7Z614 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.24■□□□□ 0.99
SNX20Q7Z614 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNX20Q7Z614 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.24■□□□□ 0.99
SNX20Q7Z614 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNX20Q7Z614 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SNX20Q7Z614 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.23■□□□□ 0.99
SNX20Q7Z614 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.23■□□□□ 0.99
SNX20Q7Z614 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.23■□□□□ 0.99
SNX20Q7Z614 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SNX20Q7Z614 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SNX20Q7Z614 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNX20Q7Z614 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms