Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C9orf139Q6ZV77 GPX1P1-201ENST00000388829 606 ntBASIC17.3■□□□□ 0.36
C9orf139Q6ZV77 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
C9orf139Q6ZV77 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
C9orf139Q6ZV77 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.3■□□□□ 0.36
C9orf139Q6ZV77 LINC00526-201ENST00000581067 1875 ntBASIC17.3■□□□□ 0.36
C9orf139Q6ZV77 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C9orf139Q6ZV77 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
C9orf139Q6ZV77 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.3■□□□□ 0.36
C9orf139Q6ZV77 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C9orf139Q6ZV77 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C9orf139Q6ZV77 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
C9orf139Q6ZV77 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C9orf139Q6ZV77 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C9orf139Q6ZV77 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C9orf139Q6ZV77 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
C9orf139Q6ZV77 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C9orf139Q6ZV77 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C9orf139Q6ZV77 AC007322.1-201ENST00000426983 750 ntBASIC17.29■□□□□ 0.36
C9orf139Q6ZV77 SLC7A5P1-201ENST00000568957 537 ntBASIC17.29■□□□□ 0.36
C9orf139Q6ZV77 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.29■□□□□ 0.36
C9orf139Q6ZV77 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
C9orf139Q6ZV77 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.29■□□□□ 0.36
C9orf139Q6ZV77 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
C9orf139Q6ZV77 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.29■□□□□ 0.36
C9orf139Q6ZV77 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C9orf139Q6ZV77 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C9orf139Q6ZV77 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
C9orf139Q6ZV77 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.29■□□□□ 0.36
C9orf139Q6ZV77 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
C9orf139Q6ZV77 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C9orf139Q6ZV77 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C9orf139Q6ZV77 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.28■□□□□ 0.36
C9orf139Q6ZV77 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C9orf139Q6ZV77 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C9orf139Q6ZV77 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C9orf139Q6ZV77 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
C9orf139Q6ZV77 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.28■□□□□ 0.36
C9orf139Q6ZV77 EEF1DP3-203ENST00000566025 782 ntBASIC17.28■□□□□ 0.36
C9orf139Q6ZV77 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.28■□□□□ 0.36
C9orf139Q6ZV77 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.28■□□□□ 0.36
C9orf139Q6ZV77 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.28■□□□□ 0.36
C9orf139Q6ZV77 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
C9orf139Q6ZV77 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.28■□□□□ 0.36
C9orf139Q6ZV77 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
C9orf139Q6ZV77 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
C9orf139Q6ZV77 AC012676.1-201ENST00000574705 1949 ntBASIC17.27■□□□□ 0.36
C9orf139Q6ZV77 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.27■□□□□ 0.36
C9orf139Q6ZV77 AP006587.3-201ENST00000525742 1516 ntBASIC17.27■□□□□ 0.36
C9orf139Q6ZV77 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
C9orf139Q6ZV77 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
C9orf139Q6ZV77 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
C9orf139Q6ZV77 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
C9orf139Q6ZV77 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.27■□□□□ 0.36
C9orf139Q6ZV77 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
C9orf139Q6ZV77 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.27■□□□□ 0.36
C9orf139Q6ZV77 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.27■□□□□ 0.36
C9orf139Q6ZV77 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.27■□□□□ 0.36
C9orf139Q6ZV77 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.27■□□□□ 0.36
C9orf139Q6ZV77 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
C9orf139Q6ZV77 AC053503.5-201ENST00000601508 636 ntBASIC17.27■□□□□ 0.36
C9orf139Q6ZV77 AL121832.2-201ENST00000610979 668 ntBASIC17.27■□□□□ 0.36
C9orf139Q6ZV77 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
C9orf139Q6ZV77 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
C9orf139Q6ZV77 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
C9orf139Q6ZV77 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.27■□□□□ 0.35
C9orf139Q6ZV77 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.27■□□□□ 0.35
C9orf139Q6ZV77 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
C9orf139Q6ZV77 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
C9orf139Q6ZV77 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf139Q6ZV77 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf139Q6ZV77 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf139Q6ZV77 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf139Q6ZV77 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.26■□□□□ 0.35
C9orf139Q6ZV77 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.26■□□□□ 0.35
C9orf139Q6ZV77 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf139Q6ZV77 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf139Q6ZV77 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.26■□□□□ 0.35
C9orf139Q6ZV77 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.26■□□□□ 0.35
C9orf139Q6ZV77 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf139Q6ZV77 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.26■□□□□ 0.35
C9orf139Q6ZV77 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.26■□□□□ 0.35
C9orf139Q6ZV77 AC005181.1-201ENST00000604782 1256 ntBASIC17.26■□□□□ 0.35
C9orf139Q6ZV77 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.26■□□□□ 0.35
C9orf139Q6ZV77 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.26■□□□□ 0.35
C9orf139Q6ZV77 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf139Q6ZV77 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf139Q6ZV77 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf139Q6ZV77 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.26■□□□□ 0.35
C9orf139Q6ZV77 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf139Q6ZV77 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.25■□□□□ 0.35
C9orf139Q6ZV77 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf139Q6ZV77 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf139Q6ZV77 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf139Q6ZV77 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.25■□□□□ 0.35
C9orf139Q6ZV77 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf139Q6ZV77 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf139Q6ZV77 AC142086.2-201ENST00000569753 217 ntBASIC17.25■□□□□ 0.35
C9orf139Q6ZV77 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.25■□□□□ 0.35
C9orf139Q6ZV77 AL050303.2-201ENST00000619798 666 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms