Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATPAF1Q5TC12 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.49■□□□□ 0.55
ATPAF1Q5TC12 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATPAF1Q5TC12 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ATPAF1Q5TC12 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATPAF1Q5TC12 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
ATPAF1Q5TC12 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATPAF1Q5TC12 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATPAF1Q5TC12 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATPAF1Q5TC12 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATPAF1Q5TC12 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ATPAF1Q5TC12 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATPAF1Q5TC12 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATPAF1Q5TC12 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATPAF1Q5TC12 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATPAF1Q5TC12 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATPAF1Q5TC12 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ATPAF1Q5TC12 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATPAF1Q5TC12 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.48■□□□□ 0.55
ATPAF1Q5TC12 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.48■□□□□ 0.55
ATPAF1Q5TC12 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATPAF1Q5TC12 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATPAF1Q5TC12 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATPAF1Q5TC12 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.48■□□□□ 0.55
ATPAF1Q5TC12 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
ATPAF1Q5TC12 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
ATPAF1Q5TC12 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATPAF1Q5TC12 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.47■□□□□ 0.55
ATPAF1Q5TC12 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATPAF1Q5TC12 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATPAF1Q5TC12 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.47■□□□□ 0.55
ATPAF1Q5TC12 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATPAF1Q5TC12 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.47■□□□□ 0.55
ATPAF1Q5TC12 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATPAF1Q5TC12 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
ATPAF1Q5TC12 AC136469.2-201ENST00000623944 1028 ntBASIC18.47■□□□□ 0.55
ATPAF1Q5TC12 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.47■□□□□ 0.55
ATPAF1Q5TC12 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ATPAF1Q5TC12 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATPAF1Q5TC12 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
ATPAF1Q5TC12 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATPAF1Q5TC12 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.47■□□□□ 0.55
ATPAF1Q5TC12 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
ATPAF1Q5TC12 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATPAF1Q5TC12 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATPAF1Q5TC12 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
ATPAF1Q5TC12 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATPAF1Q5TC12 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATPAF1Q5TC12 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATPAF1Q5TC12 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATPAF1Q5TC12 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATPAF1Q5TC12 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATPAF1Q5TC12 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATPAF1Q5TC12 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ATPAF1Q5TC12 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ATPAF1Q5TC12 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATPAF1Q5TC12 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATPAF1Q5TC12 AC096631.2-201ENST00000436136 790 ntBASIC18.46■□□□□ 0.55
ATPAF1Q5TC12 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.46■□□□□ 0.55
ATPAF1Q5TC12 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATPAF1Q5TC12 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.46■□□□□ 0.55
ATPAF1Q5TC12 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ATPAF1Q5TC12 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
ATPAF1Q5TC12 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATPAF1Q5TC12 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATPAF1Q5TC12 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ATPAF1Q5TC12 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ATPAF1Q5TC12 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATPAF1Q5TC12 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATPAF1Q5TC12 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATPAF1Q5TC12 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ATPAF1Q5TC12 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
ATPAF1Q5TC12 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATPAF1Q5TC12 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.45■□□□□ 0.54
ATPAF1Q5TC12 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ATPAF1Q5TC12 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATPAF1Q5TC12 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.45■□□□□ 0.54
ATPAF1Q5TC12 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATPAF1Q5TC12 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.45■□□□□ 0.54
ATPAF1Q5TC12 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.45■□□□□ 0.54
ATPAF1Q5TC12 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATPAF1Q5TC12 AL136162.1-201ENST00000607711 1078 ntBASIC18.45■□□□□ 0.54
ATPAF1Q5TC12 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATPAF1Q5TC12 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATPAF1Q5TC12 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.45■□□□□ 0.54
ATPAF1Q5TC12 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATPAF1Q5TC12 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.44■□□□□ 0.54
ATPAF1Q5TC12 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATPAF1Q5TC12 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATPAF1Q5TC12 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATPAF1Q5TC12 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATPAF1Q5TC12 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATPAF1Q5TC12 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATPAF1Q5TC12 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATPAF1Q5TC12 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
ATPAF1Q5TC12 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.44■□□□□ 0.54
ATPAF1Q5TC12 AC106739.1-201ENST00000617035 715 ntBASIC18.44■□□□□ 0.54
ATPAF1Q5TC12 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATPAF1Q5TC12 AC135279.3-201ENST00000610945 1311 ntBASIC18.44■□□□□ 0.54
ATPAF1Q5TC12 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms