Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM60Q495X7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM60Q495X7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
TRIM60Q495X7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM60Q495X7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM60Q495X7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.69■■□□□ 1.38
TRIM60Q495X7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23.69■■□□□ 1.38
TRIM60Q495X7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM60Q495X7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.69■■□□□ 1.38
TRIM60Q495X7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM60Q495X7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.69■■□□□ 1.38
TRIM60Q495X7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIM60Q495X7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM60Q495X7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM60Q495X7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
TRIM60Q495X7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM60Q495X7 AC079089.2-201ENST00000531211 1277 ntBASIC23.68■■□□□ 1.38
TRIM60Q495X7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.68■■□□□ 1.38
TRIM60Q495X7 EEF1DP3-203ENST00000566025 782 ntBASIC23.68■■□□□ 1.38
TRIM60Q495X7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM60Q495X7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM60Q495X7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
TRIM60Q495X7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
TRIM60Q495X7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.68■■□□□ 1.38
TRIM60Q495X7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM60Q495X7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.68■■□□□ 1.38
TRIM60Q495X7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.67■■□□□ 1.38
TRIM60Q495X7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.67■■□□□ 1.38
TRIM60Q495X7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM60Q495X7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM60Q495X7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC23.67■■□□□ 1.38
TRIM60Q495X7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.67■■□□□ 1.38
TRIM60Q495X7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.67■■□□□ 1.38
TRIM60Q495X7 AC091874.3-201ENST00000512672 1195 ntBASIC23.67■■□□□ 1.38
TRIM60Q495X7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC23.67■■□□□ 1.38
TRIM60Q495X7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.67■■□□□ 1.38
TRIM60Q495X7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.67■■□□□ 1.38
TRIM60Q495X7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM60Q495X7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.67■■□□□ 1.38
TRIM60Q495X7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.67■■□□□ 1.38
TRIM60Q495X7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC23.67■■□□□ 1.38
TRIM60Q495X7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM60Q495X7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM60Q495X7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM60Q495X7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC23.66■■□□□ 1.38
TRIM60Q495X7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM60Q495X7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM60Q495X7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.66■■□□□ 1.38
TRIM60Q495X7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
TRIM60Q495X7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.66■■□□□ 1.38
TRIM60Q495X7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM60Q495X7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC23.66■■□□□ 1.38
TRIM60Q495X7 UNC93B4-201ENST00000505679 747 ntBASIC23.66■■□□□ 1.38
TRIM60Q495X7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
TRIM60Q495X7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
TRIM60Q495X7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM60Q495X7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC23.65■■□□□ 1.38
TRIM60Q495X7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM60Q495X7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM60Q495X7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
TRIM60Q495X7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.65■■□□□ 1.38
TRIM60Q495X7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC23.65■■□□□ 1.38
TRIM60Q495X7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC23.65■■□□□ 1.38
TRIM60Q495X7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM60Q495X7 AC053503.5-201ENST00000601508 636 ntBASIC23.65■■□□□ 1.38
TRIM60Q495X7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM60Q495X7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.64■■□□□ 1.38
TRIM60Q495X7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TRIM60Q495X7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
TRIM60Q495X7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.64■■□□□ 1.37
TRIM60Q495X7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM60Q495X7 LINC01124-201ENST00000409786 2117 ntBASIC23.64■■□□□ 1.37
TRIM60Q495X7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM60Q495X7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.64■■□□□ 1.37
TRIM60Q495X7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
TRIM60Q495X7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.64■■□□□ 1.37
TRIM60Q495X7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM60Q495X7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.64■■□□□ 1.37
TRIM60Q495X7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM60Q495X7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM60Q495X7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM60Q495X7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.64■■□□□ 1.37
TRIM60Q495X7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
TRIM60Q495X7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.64■■□□□ 1.37
TRIM60Q495X7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
TRIM60Q495X7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM60Q495X7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM60Q495X7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM60Q495X7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM60Q495X7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.63■■□□□ 1.37
TRIM60Q495X7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
TRIM60Q495X7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM60Q495X7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.63■■□□□ 1.37
TRIM60Q495X7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.63■■□□□ 1.37
TRIM60Q495X7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
TRIM60Q495X7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM60Q495X7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.62■■□□□ 1.37
TRIM60Q495X7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM60Q495X7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC23.62■■□□□ 1.37
TRIM60Q495X7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms