Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLCNKAP51800 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CLCNKAP51800 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21■□□□□ 0.95
CLCNKAP51800 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21■□□□□ 0.95
CLCNKAP51800 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21■□□□□ 0.95
CLCNKAP51800 GXYLT1P2-201ENST00000433312 1230 ntBASIC21■□□□□ 0.95
CLCNKAP51800 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21■□□□□ 0.95
CLCNKAP51800 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21■□□□□ 0.95
CLCNKAP51800 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21■□□□□ 0.95
CLCNKAP51800 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLCNKAP51800 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CLCNKAP51800 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLCNKAP51800 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLCNKAP51800 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLCNKAP51800 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CLCNKAP51800 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CLCNKAP51800 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
CLCNKAP51800 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.99■□□□□ 0.95
CLCNKAP51800 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.99■□□□□ 0.95
CLCNKAP51800 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLCNKAP51800 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLCNKAP51800 AC004854.2-201ENST00000608450 1441 ntBASIC20.99■□□□□ 0.95
CLCNKAP51800 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLCNKAP51800 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CLCNKAP51800 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLCNKAP51800 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CLCNKAP51800 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLCNKAP51800 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLCNKAP51800 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLCNKAP51800 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLCNKAP51800 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCNKAP51800 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLCNKAP51800 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.98■□□□□ 0.95
CLCNKAP51800 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCNKAP51800 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCNKAP51800 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLCNKAP51800 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.98■□□□□ 0.95
CLCNKAP51800 KRT19P1-201ENST00000405746 1186 ntBASIC20.98■□□□□ 0.95
CLCNKAP51800 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.98■□□□□ 0.95
CLCNKAP51800 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.98■□□□□ 0.95
CLCNKAP51800 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.98■□□□□ 0.95
CLCNKAP51800 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCNKAP51800 KRT87P-202ENST00000534226 1464 ntBASIC20.98■□□□□ 0.95
CLCNKAP51800 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.98■□□□□ 0.95
CLCNKAP51800 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CLCNKAP51800 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.98■□□□□ 0.95
CLCNKAP51800 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCNKAP51800 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCNKAP51800 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CLCNKAP51800 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CLCNKAP51800 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCNKAP51800 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCNKAP51800 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCNKAP51800 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCNKAP51800 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCNKAP51800 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.97■□□□□ 0.95
CLCNKAP51800 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCNKAP51800 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.97■□□□□ 0.95
CLCNKAP51800 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCNKAP51800 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.97■□□□□ 0.95
CLCNKAP51800 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.97■□□□□ 0.95
CLCNKAP51800 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.97■□□□□ 0.95
CLCNKAP51800 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCNKAP51800 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.97■□□□□ 0.95
CLCNKAP51800 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.97■□□□□ 0.95
CLCNKAP51800 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.97■□□□□ 0.95
CLCNKAP51800 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLCNKAP51800 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCNKAP51800 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCNKAP51800 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CLCNKAP51800 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCNKAP51800 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLCNKAP51800 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
CLCNKAP51800 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.97■□□□□ 0.95
CLCNKAP51800 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLCNKAP51800 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLCNKAP51800 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLCNKAP51800 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLCNKAP51800 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLCNKAP51800 GUSBP5-202ENST00000510805 1989 ntBASIC20.96■□□□□ 0.95
CLCNKAP51800 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.96■□□□□ 0.95
CLCNKAP51800 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLCNKAP51800 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.96■□□□□ 0.95
CLCNKAP51800 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.96■□□□□ 0.95
CLCNKAP51800 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.96■□□□□ 0.95
CLCNKAP51800 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLCNKAP51800 AC092437.1-201ENST00000624794 1048 ntBASIC20.96■□□□□ 0.95
CLCNKAP51800 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLCNKAP51800 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLCNKAP51800 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
CLCNKAP51800 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.95■□□□□ 0.94
CLCNKAP51800 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLCNKAP51800 AP006587.3-201ENST00000525742 1516 ntBASIC20.95■□□□□ 0.94
CLCNKAP51800 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLCNKAP51800 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.95■□□□□ 0.94
CLCNKAP51800 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLCNKAP51800 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.95■□□□□ 0.94
CLCNKAP51800 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLCNKAP51800 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLCNKAP51800 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms