Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
GABRA4P48169 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GABRA4P48169 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.38■□□□□ 0.85
GABRA4P48169 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GABRA4P48169 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.38■□□□□ 0.85
GABRA4P48169 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.38■□□□□ 0.85
GABRA4P48169 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GABRA4P48169 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.37■□□□□ 0.85
GABRA4P48169 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.37■□□□□ 0.85
GABRA4P48169 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.37■□□□□ 0.85
GABRA4P48169 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.37■□□□□ 0.85
GABRA4P48169 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GABRA4P48169 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.37■□□□□ 0.85
GABRA4P48169 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.37■□□□□ 0.85
GABRA4P48169 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.37■□□□□ 0.85
GABRA4P48169 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GABRA4P48169 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
GABRA4P48169 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GABRA4P48169 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GABRA4P48169 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
GABRA4P48169 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
GABRA4P48169 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GABRA4P48169 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
GABRA4P48169 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GABRA4P48169 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.36■□□□□ 0.85
GABRA4P48169 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.36■□□□□ 0.85
GABRA4P48169 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GABRA4P48169 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GABRA4P48169 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
GABRA4P48169 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GABRA4P48169 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GABRA4P48169 EEF1DP3-203ENST00000566025 782 ntBASIC20.36■□□□□ 0.85
GABRA4P48169 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.36■□□□□ 0.85
GABRA4P48169 AC092053.2-201ENST00000640557 1818 ntBASIC20.36■□□□□ 0.85
GABRA4P48169 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
GABRA4P48169 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GABRA4P48169 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GABRA4P48169 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GABRA4P48169 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GABRA4P48169 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
GABRA4P48169 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.35■□□□□ 0.85
GABRA4P48169 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.35■□□□□ 0.85
GABRA4P48169 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.35■□□□□ 0.85
GABRA4P48169 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.35■□□□□ 0.85
GABRA4P48169 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
GABRA4P48169 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.35■□□□□ 0.85
GABRA4P48169 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
GABRA4P48169 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GABRA4P48169 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GABRA4P48169 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.35■□□□□ 0.85
GABRA4P48169 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
GABRA4P48169 AC068473.5-201ENST00000616428 2072 ntBASIC20.34■□□□□ 0.85
GABRA4P48169 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
GABRA4P48169 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
GABRA4P48169 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
GABRA4P48169 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GABRA4P48169 AC016769.1-201ENST00000409132 1010 ntBASIC20.34■□□□□ 0.85
GABRA4P48169 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.34■□□□□ 0.85
GABRA4P48169 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.34■□□□□ 0.85
GABRA4P48169 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.34■□□□□ 0.85
GABRA4P48169 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.34■□□□□ 0.85
GABRA4P48169 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.34■□□□□ 0.85
GABRA4P48169 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.34■□□□□ 0.85
GABRA4P48169 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GABRA4P48169 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.34■□□□□ 0.85
GABRA4P48169 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.34■□□□□ 0.85
GABRA4P48169 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
GABRA4P48169 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
GABRA4P48169 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GABRA4P48169 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
GABRA4P48169 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
GABRA4P48169 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GABRA4P48169 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.33■□□□□ 0.85
GABRA4P48169 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GABRA4P48169 AC090192.1-201ENST00000517740 490 ntBASIC20.33■□□□□ 0.85
GABRA4P48169 AC138907.5-202ENST00000569484 235 ntBASIC20.33■□□□□ 0.85
GABRA4P48169 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
GABRA4P48169 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
GABRA4P48169 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
GABRA4P48169 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.33■□□□□ 0.84
GABRA4P48169 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
GABRA4P48169 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GABRA4P48169 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GABRA4P48169 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.33■□□□□ 0.84
GABRA4P48169 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
GABRA4P48169 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.33■□□□□ 0.84
GABRA4P48169 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
GABRA4P48169 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
GABRA4P48169 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GABRA4P48169 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GABRA4P48169 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
GABRA4P48169 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GABRA4P48169 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GABRA4P48169 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GABRA4P48169 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
GABRA4P48169 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
GABRA4P48169 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.32■□□□□ 0.84
GABRA4P48169 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
GABRA4P48169 AP001160.3-201ENST00000601484 763 ntBASIC20.32■□□□□ 0.84
GABRA4P48169 AC053503.5-201ENST00000601508 636 ntBASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms