Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
KDM5CP41229 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC32.42■■■□□ 2.78
KDM5CP41229 AC004812.2-201ENST00000611079 2094 ntBASIC32.42■■■□□ 2.78
KDM5CP41229 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
KDM5CP41229 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC32.42■■■□□ 2.78
KDM5CP41229 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC32.42■■■□□ 2.78
KDM5CP41229 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
KDM5CP41229 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
KDM5CP41229 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC32.42■■■□□ 2.78
KDM5CP41229 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
KDM5CP41229 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC32.42■■■□□ 2.78
KDM5CP41229 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC32.42■■■□□ 2.78
KDM5CP41229 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
KDM5CP41229 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC32.41■■■□□ 2.78
KDM5CP41229 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
KDM5CP41229 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC32.41■■■□□ 2.78
KDM5CP41229 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC32.41■■■□□ 2.78
KDM5CP41229 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC32.41■■■□□ 2.78
KDM5CP41229 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
KDM5CP41229 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC32.41■■■□□ 2.78
KDM5CP41229 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC32.41■■■□□ 2.78
KDM5CP41229 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
KDM5CP41229 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
KDM5CP41229 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC32.41■■■□□ 2.78
KDM5CP41229 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC32.41■■■□□ 2.78
KDM5CP41229 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
KDM5CP41229 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC32.41■■■□□ 2.78
KDM5CP41229 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
KDM5CP41229 CASP6-205ENST00000505486 538 ntTSL 4 BASIC32.41■■■□□ 2.78
KDM5CP41229 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC32.41■■■□□ 2.78
KDM5CP41229 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC32.41■■■□□ 2.78
KDM5CP41229 AC053503.5-201ENST00000601508 636 ntBASIC32.41■■■□□ 2.78
KDM5CP41229 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
KDM5CP41229 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
KDM5CP41229 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
KDM5CP41229 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC32.4■■■□□ 2.78
KDM5CP41229 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC32.4■■■□□ 2.78
KDM5CP41229 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC32.4■■■□□ 2.78
KDM5CP41229 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC32.4■■■□□ 2.78
KDM5CP41229 AC006058.3-201ENST00000606217 1069 ntBASIC32.4■■■□□ 2.78
KDM5CP41229 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
KDM5CP41229 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
KDM5CP41229 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
KDM5CP41229 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC32.39■■■□□ 2.78
KDM5CP41229 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
KDM5CP41229 AC079089.2-201ENST00000531211 1277 ntBASIC32.39■■■□□ 2.78
KDM5CP41229 ISCU-212ENST00000547005 795 ntTSL 3 BASIC32.39■■■□□ 2.78
KDM5CP41229 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC32.39■■■□□ 2.78
KDM5CP41229 MMD2-204ENST00000612910 778 ntTSL 5 BASIC32.39■■■□□ 2.78
KDM5CP41229 AP006294.2-201ENST00000641667 209 ntBASIC32.39■■■□□ 2.78
KDM5CP41229 AP004607.7-201ENST00000527152 1677 ntBASIC32.39■■■□□ 2.78
KDM5CP41229 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC32.39■■■□□ 2.77
KDM5CP41229 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC32.39■■■□□ 2.77
KDM5CP41229 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC32.38■■■□□ 2.77
KDM5CP41229 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC32.38■■■□□ 2.77
KDM5CP41229 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
KDM5CP41229 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
KDM5CP41229 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC32.38■■■□□ 2.77
KDM5CP41229 AL162412.1-201ENST00000567129 965 ntBASIC32.38■■■□□ 2.77
KDM5CP41229 INO80E-214ENST00000620599 515 ntTSL 2 BASIC32.38■■■□□ 2.77
KDM5CP41229 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
KDM5CP41229 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC32.37■■■□□ 2.77
KDM5CP41229 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC32.37■■■□□ 2.77
KDM5CP41229 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC32.37■■■□□ 2.77
KDM5CP41229 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
KDM5CP41229 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC32.37■■■□□ 2.77
KDM5CP41229 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC32.37■■■□□ 2.77
KDM5CP41229 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC32.37■■■□□ 2.77
KDM5CP41229 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC32.37■■■□□ 2.77
KDM5CP41229 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC32.36■■■□□ 2.77
KDM5CP41229 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC32.36■■■□□ 2.77
KDM5CP41229 FGF8-207ENST00000618991 856 ntTSL 3 BASIC32.36■■■□□ 2.77
KDM5CP41229 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC32.36■■■□□ 2.77
KDM5CP41229 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC32.36■■■□□ 2.77
KDM5CP41229 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC32.36■■■□□ 2.77
KDM5CP41229 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
KDM5CP41229 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
KDM5CP41229 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
KDM5CP41229 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
KDM5CP41229 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC32.36■■■□□ 2.77
KDM5CP41229 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
KDM5CP41229 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC32.36■■■□□ 2.77
KDM5CP41229 AC128676.1-201ENST00000454392 318 ntBASIC32.36■■■□□ 2.77
KDM5CP41229 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC32.36■■■□□ 2.77
KDM5CP41229 UNC93B5-201ENST00000530315 699 ntBASIC32.36■■■□□ 2.77
KDM5CP41229 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC32.36■■■□□ 2.77
KDM5CP41229 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
KDM5CP41229 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC32.35■■■□□ 2.77
KDM5CP41229 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
KDM5CP41229 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
KDM5CP41229 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC32.35■■■□□ 2.77
KDM5CP41229 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
KDM5CP41229 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC32.35■■■□□ 2.77
KDM5CP41229 MMAB-206ENST00000540016 945 ntTSL 3 BASIC32.35■■■□□ 2.77
KDM5CP41229 AL034346.1-201ENST00000568244 1277 ntBASIC32.35■■■□□ 2.77
KDM5CP41229 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC32.35■■■□□ 2.77
KDM5CP41229 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC32.35■■■□□ 2.77
KDM5CP41229 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC32.35■■■□□ 2.77
KDM5CP41229 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC32.35■■■□□ 2.77
KDM5CP41229 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC32.34■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms