Protein–RNA interactions for Protein: P38235

YBR053C, Uncharacterized protein YBR053C, yeast

Predictions only

Length 358 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
YBR053C	P38235	FOL3	YMR113W	1284 nt		4.35	□□□□□ -1.71
YBR053C	P38235	YMR315W	YMR315W	1050 nt		4.35	□□□□□ -1.71
YBR053C	P38235	CDC21	YOR074C	915 nt		4.35	□□□□□ -1.71
YBR053C	P38235	YOR263C	YOR263C	408 nt		4.35	□□□□□ -1.71
YBR053C	P38235	HCA4	YJL033W	2313 nt		4.35	□□□□□ -1.71
YBR053C	P38235	CTT1	YGR088W	1689 nt		4.35	□□□□□ -1.71
YBR053C	P38235	MSK1	YNL073W	1731 nt		4.35	□□□□□ -1.71
YBR053C	P38235	NGG1	YDR176W	2109 nt		4.34	□□□□□ -1.71
YBR053C	P38235	PCA1	YBR295W	3651 nt		4.34	□□□□□ -1.71
YBR053C	P38235	IZH1	YDR492W	951 nt		4.34	□□□□□ -1.71
YBR053C	P38235	RMD6	YEL072W	696 nt		4.34	□□□□□ -1.71
YBR053C	P38235	TMA20	YER007C-A	546 nt		4.34	□□□□□ -1.71
YBR053C	P38235	UPF3	YGR072W	1164 nt		4.34	□□□□□ -1.71
YBR053C	P38235	YJL133C-A	YJL133C-A	225 nt		4.34	□□□□□ -1.71
YBR053C	P38235	ATG27	YJL178C	816 nt		4.34	□□□□□ -1.71
YBR053C	P38235	NFU1	YKL040C	771 nt		4.34	□□□□□ -1.71
YBR053C	P38235	RFU1	YLR073C	603 nt		4.34	□□□□□ -1.71
YBR053C	P38235	COQ9	YLR201C	783 nt		4.34	□□□□□ -1.71
YBR053C	P38235	YMR310C	YMR310C	954 nt		4.34	□□□□□ -1.71
YBR053C	P38235	ATG8	YBL078C	354 nt		4.34	□□□□□ -1.71
YBR053C	P38235	MCK1	YNL307C	1128 nt		4.34	□□□□□ -1.71
YBR053C	P38235	VPS69	YPR087W	321 nt		4.34	□□□□□ -1.71
YBR053C	P38235	TRM11	YOL124C	1302 nt		4.34	□□□□□ -1.71
YBR053C	P38235	PRM7	YDL039C	2097 nt		4.34	□□□□□ -1.71
YBR053C	P38235	CDC48	YDL126C	2508 nt		4.34	□□□□□ -1.72
YBR053C	P38235	TSC13	YDL015C	933 nt		4.33	□□□□□ -1.72
YBR053C	P38235	TMA17	YDL110C	453 nt		4.33	□□□□□ -1.72
YBR053C	P38235	YDR271C	YDR271C	372 nt		4.33	□□□□□ -1.72
YBR053C	P38235	FYV7	YLR068W	456 nt		4.33	□□□□□ -1.72
YBR053C	P38235	MRPL3	YMR024W	1173 nt		4.33	□□□□□ -1.72
YBR053C	P38235	ATP11	YNL315C	957 nt		4.33	□□□□□ -1.72
YBR053C	P38235	RET3	YPL010W	570 nt		4.33	□□□□□ -1.72
YBR053C	P38235	PRM3	YPL192C	402 nt		4.33	□□□□□ -1.72
YBR053C	P38235	SUA7	YPR086W	1038 nt		4.33	□□□□□ -1.72
YBR053C	P38235	YCL021W-A	YCL021W-A	378 nt		4.33	□□□□□ -1.72
YBR053C	P38235	SEC9	YGR009C	1956 nt		4.33	□□□□□ -1.72
YBR053C	P38235	ARX1	YDR101C	1782 nt		4.32	□□□□□ -1.72
YBR053C	P38235	PEX29	YDR479C	1665 nt		4.32	□□□□□ -1.72
YBR053C	P38235	STP4	YDL048C	1473 nt		4.32	□□□□□ -1.72
YBR053C	P38235	KRE29	YER038C	1395 nt		4.32	□□□□□ -1.72
YBR053C	P38235	RPS11A	YDR025W	471 nt		4.32	□□□□□ -1.72
YBR053C	P38235	DPB4	YDR121W	591 nt		4.32	□□□□□ -1.72
YBR053C	P38235	MAG1	YER142C	891 nt		4.32	□□□□□ -1.72
YBR053C	P38235	LOC1	YFR001W	615 nt		4.32	□□□□□ -1.72
YBR053C	P38235	RPS25A	YGR027C	327 nt		4.32	□□□□□ -1.72
YBR053C	P38235	MED11	YMR112C	396 nt		4.32	□□□□□ -1.72
YBR053C	P38235	YPL114W	YPL114W	420 nt		4.32	□□□□□ -1.72
YBR053C	P38235	SPB4	YFL002C	1821 nt		4.32	□□□□□ -1.72
YBR053C	P38235	ADP1	YCR011C	3150 nt		4.32	□□□□□ -1.72
YBR053C	P38235	FLC1	YPL221W	2382 nt		4.32	□□□□□ -1.72
YBR053C	P38235	MDR1	YGR100W	2853 nt		4.32	□□□□□ -1.72
YBR053C	P38235	RAD16	YBR114W	2373 nt		4.31	□□□□□ -1.72
YBR053C	P38235	YDL228C	YDL228C	642 nt		4.31	□□□□□ -1.72
YBR053C	P38235	tQ(UUG)C	tQ(UUG)C	72 nt		4.31	□□□□□ -1.72
YBR053C	P38235	tQ(UUG)D1	tQ(UUG)D1	72 nt		4.31	□□□□□ -1.72
YBR053C	P38235	tQ(UUG)D2	tQ(UUG)D2	72 nt		4.31	□□□□□ -1.72
YBR053C	P38235	tQ(UUG)D3	tQ(UUG)D3	72 nt		4.31	□□□□□ -1.72
YBR053C	P38235	tQ(UUG)E1	tQ(UUG)E1	72 nt		4.31	□□□□□ -1.72
YBR053C	P38235	tQ(UUG)H	tQ(UUG)H	72 nt		4.31	□□□□□ -1.72
YBR053C	P38235	tQ(UUG)L	tQ(UUG)L	72 nt		4.31	□□□□□ -1.72
YBR053C	P38235	CYC1	YJR048W	330 nt		4.31	□□□□□ -1.72
YBR053C	P38235	YJR087W	YJR087W	351 nt		4.31	□□□□□ -1.72
YBR053C	P38235	YKL115C	YKL115C	393 nt		4.31	□□□□□ -1.72
YBR053C	P38235	SRP40	YKR092C	1221 nt		4.31	□□□□□ -1.72
YBR053C	P38235	EOS1	YNL080C	1101 nt		4.31	□□□□□ -1.72
YBR053C	P38235	YOR131C	YOR131C	657 nt		4.31	□□□□□ -1.72
YBR053C	P38235	CTP1	YBR291C	900 nt		4.31	□□□□□ -1.72
YBR053C	P38235	MBP1	YDL056W	2502 nt		4.31	□□□□□ -1.72
YBR053C	P38235	NOP56	YLR197W	1515 nt		4.31	□□□□□ -1.72
YBR053C	P38235	SPC105	YGL093W	2754 nt		4.31	□□□□□ -1.72
YBR053C	P38235	RUD3	YOR216C	1455 nt		4.3	□□□□□ -1.72
YBR053C	P38235	BLM10	YFL007W	6432 nt		4.3	□□□□□ -1.72
YBR053C	P38235	TFA1	YKL028W	1449 nt		4.3	□□□□□ -1.72
YBR053C	P38235	MEF2	YJL102W	2460 nt		4.3	□□□□□ -1.72
YBR053C	P38235	YOR192C-A	YOR192C-A	1317 nt		4.3	□□□□□ -1.72
YBR053C	P38235	YOR343W-A	YOR343W-A	1317 nt		4.3	□□□□□ -1.72
YBR053C	P38235	BSC1	YDL037C	987 nt		4.3	□□□□□ -1.72
YBR053C	P38235	YDR246W-A	YDR246W-A	201 nt		4.3	□□□□□ -1.72
YBR053C	P38235	MRP49	YKL167C	414 nt		4.3	□□□□□ -1.72
YBR053C	P38235	RDN5-1	RDN5-1	121 nt		4.3	□□□□□ -1.72
YBR053C	P38235	RDN5-6	RDN5-6	121 nt		4.3	□□□□□ -1.72
YBR053C	P38235	YMR254C	YMR254C	309 nt		4.3	□□□□□ -1.72
YBR053C	P38235	MRM1	YOR201C	1239 nt		4.3	□□□□□ -1.72
YBR053C	P38235	LAS1	YKR063C	1509 nt		4.3	□□□□□ -1.72
YBR053C	P38235	EGT2	YNL327W	3126 nt		4.3	□□□□□ -1.72
YBR053C	P38235	TMA64	YDR117C	1698 nt		4.29	□□□□□ -1.72
YBR053C	P38235	AGA1	YNR044W	2178 nt		4.29	□□□□□ -1.72
YBR053C	P38235	YDR491C	YDR491C	492 nt		4.29	□□□□□ -1.72
YBR053C	P38235	RPL34A	YER056C-A	366 nt		4.29	□□□□□ -1.72
YBR053C	P38235	PEA2	YER149C	1263 nt		4.29	□□□□□ -1.72
YBR053C	P38235	MRPL9	YGR220C	810 nt		4.29	□□□□□ -1.72
YBR053C	P38235	TIM10	YHR005C-A	282 nt		4.29	□□□□□ -1.72
YBR053C	P38235	YIL021C-A	YIL021C-A	270 nt		4.29	□□□□□ -1.72
YBR053C	P38235	YIL171W	YIL171W	330 nt		4.29	□□□□□ -1.72
YBR053C	P38235	YLR346C	YLR346C	306 nt		4.29	□□□□□ -1.72
YBR053C	P38235	TDA5	YLR426W	981 nt		4.29	□□□□□ -1.72
YBR053C	P38235	TRM112	YNR046W	408 nt		4.29	□□□□□ -1.72
YBR053C	P38235	PSF3	YOL146W	585 nt		4.29	□□□□□ -1.72
YBR053C	P38235	GRX7	YBR014C	612 nt		4.29	□□□□□ -1.72
YBR053C	P38235	PXA1	YPL147W	2613 nt		4.29	□□□□□ -1.72

Retrieved 100 of 7,029 protein–RNA pairs in 51.6 ms