Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.43■□□□□ 0.7
GDF1P27539 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GDF1P27539 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.42■□□□□ 0.7
GDF1P27539 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GDF1P27539 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GDF1P27539 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.42■□□□□ 0.7
GDF1P27539 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.42■□□□□ 0.7
GDF1P27539 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
GDF1P27539 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.42■□□□□ 0.7
GDF1P27539 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.42■□□□□ 0.7
GDF1P27539 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GDF1P27539 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
GDF1P27539 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GDF1P27539 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GDF1P27539 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.42■□□□□ 0.7
GDF1P27539 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GDF1P27539 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GDF1P27539 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GDF1P27539 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GDF1P27539 AP006587.3-201ENST00000525742 1516 ntBASIC19.41■□□□□ 0.7
GDF1P27539 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.41■□□□□ 0.7
GDF1P27539 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.41■□□□□ 0.7
GDF1P27539 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.41■□□□□ 0.7
GDF1P27539 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
GDF1P27539 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
GDF1P27539 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
GDF1P27539 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GDF1P27539 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.41■□□□□ 0.7
GDF1P27539 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
GDF1P27539 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.41■□□□□ 0.7
GDF1P27539 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.41■□□□□ 0.7
GDF1P27539 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
GDF1P27539 AC127496.7-201ENST00000625110 1798 ntBASIC19.41■□□□□ 0.7
GDF1P27539 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GDF1P27539 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GDF1P27539 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GDF1P27539 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GDF1P27539 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
GDF1P27539 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
GDF1P27539 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
GDF1P27539 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GDF1P27539 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.4■□□□□ 0.7
GDF1P27539 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GDF1P27539 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.4■□□□□ 0.7
GDF1P27539 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GDF1P27539 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.4■□□□□ 0.7
GDF1P27539 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GDF1P27539 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
GDF1P27539 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.4■□□□□ 0.7
GDF1P27539 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.4■□□□□ 0.7
GDF1P27539 AC104187.1-201ENST00000607510 612 ntBASIC19.4■□□□□ 0.7
GDF1P27539 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GDF1P27539 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GDF1P27539 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.4■□□□□ 0.7
GDF1P27539 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GDF1P27539 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
GDF1P27539 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.4■□□□□ 0.7
GDF1P27539 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GDF1P27539 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GDF1P27539 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
GDF1P27539 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
GDF1P27539 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
GDF1P27539 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.39■□□□□ 0.69
GDF1P27539 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GDF1P27539 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
GDF1P27539 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GDF1P27539 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
GDF1P27539 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.39■□□□□ 0.69
GDF1P27539 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GDF1P27539 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GDF1P27539 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GDF1P27539 AC080038.3-201ENST00000623346 1952 ntBASIC19.39■□□□□ 0.69
GDF1P27539 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GDF1P27539 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GDF1P27539 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
GDF1P27539 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GDF1P27539 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GDF1P27539 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GDF1P27539 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.38■□□□□ 0.69
GDF1P27539 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.38■□□□□ 0.69
GDF1P27539 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
GDF1P27539 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GDF1P27539 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
GDF1P27539 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GDF1P27539 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.37■□□□□ 0.69
GDF1P27539 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GDF1P27539 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GDF1P27539 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GDF1P27539 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GDF1P27539 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.37■□□□□ 0.69
GDF1P27539 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.37■□□□□ 0.69
GDF1P27539 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.37■□□□□ 0.69
GDF1P27539 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GDF1P27539 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GDF1P27539 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
GDF1P27539 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GDF1P27539 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GDF1P27539 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GDF1P27539 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GDF1P27539 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms