Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.51■□□□□ 0.71
BMP4P12644 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
BMP4P12644 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
BMP4P12644 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BMP4P12644 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.5■□□□□ 0.71
BMP4P12644 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.5■□□□□ 0.71
BMP4P12644 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BMP4P12644 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BMP4P12644 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BMP4P12644 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.5■□□□□ 0.71
BMP4P12644 MIR935-201ENST00000401179 91 ntBASIC19.5■□□□□ 0.71
BMP4P12644 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.5■□□□□ 0.71
BMP4P12644 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BMP4P12644 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BMP4P12644 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.5■□□□□ 0.71
BMP4P12644 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BMP4P12644 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
BMP4P12644 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.5■□□□□ 0.71
BMP4P12644 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.5■□□□□ 0.71
BMP4P12644 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
BMP4P12644 AC135279.3-201ENST00000610945 1311 ntBASIC19.5■□□□□ 0.71
BMP4P12644 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BMP4P12644 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
BMP4P12644 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BMP4P12644 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BMP4P12644 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.49■□□□□ 0.71
BMP4P12644 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BMP4P12644 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
BMP4P12644 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BMP4P12644 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.49■□□□□ 0.71
BMP4P12644 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BMP4P12644 AC087742.1-201ENST00000575880 1738 ntBASIC19.49■□□□□ 0.71
BMP4P12644 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BMP4P12644 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BMP4P12644 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.49■□□□□ 0.71
BMP4P12644 AL136162.1-201ENST00000607711 1078 ntBASIC19.49■□□□□ 0.71
BMP4P12644 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.49■□□□□ 0.71
BMP4P12644 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BMP4P12644 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
BMP4P12644 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
BMP4P12644 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BMP4P12644 AF106564.1-201ENST00000607058 2553 ntBASIC19.48■□□□□ 0.71
BMP4P12644 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BMP4P12644 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BMP4P12644 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
BMP4P12644 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BMP4P12644 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.48■□□□□ 0.71
BMP4P12644 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.48■□□□□ 0.71
BMP4P12644 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BMP4P12644 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BMP4P12644 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.48■□□□□ 0.71
BMP4P12644 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
BMP4P12644 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BMP4P12644 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BMP4P12644 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.48■□□□□ 0.71
BMP4P12644 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BMP4P12644 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BMP4P12644 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BMP4P12644 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BMP4P12644 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
BMP4P12644 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.47■□□□□ 0.71
BMP4P12644 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.47■□□□□ 0.71
BMP4P12644 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
BMP4P12644 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
BMP4P12644 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
BMP4P12644 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
BMP4P12644 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
BMP4P12644 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BMP4P12644 AC142381.2-201ENST00000566120 298 ntBASIC19.47■□□□□ 0.71
BMP4P12644 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
BMP4P12644 SYT6-210ENST00000641643 1587 ntBASIC19.47■□□□□ 0.71
BMP4P12644 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BMP4P12644 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.47■□□□□ 0.71
BMP4P12644 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BMP4P12644 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BMP4P12644 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BMP4P12644 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
BMP4P12644 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
BMP4P12644 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BMP4P12644 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.46■□□□□ 0.71
BMP4P12644 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BMP4P12644 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.46■□□□□ 0.71
BMP4P12644 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.46■□□□□ 0.71
BMP4P12644 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BMP4P12644 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
BMP4P12644 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BMP4P12644 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BMP4P12644 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BMP4P12644 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BMP4P12644 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BMP4P12644 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
BMP4P12644 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BMP4P12644 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BMP4P12644 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.46■□□□□ 0.71
BMP4P12644 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
BMP4P12644 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
BMP4P12644 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BMP4P12644 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BMP4P12644 EDA-201ENST00000338901 1233 ntBASIC19.45■□□□□ 0.7
BMP4P12644 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms