Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CLDN1O95832 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN1O95832 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN1O95832 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CLDN1O95832 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.08■□□□□ 0.65
CLDN1O95832 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN1O95832 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN1O95832 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN1O95832 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN1O95832 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN1O95832 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.08■□□□□ 0.64
CLDN1O95832 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN1O95832 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN1O95832 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.08■□□□□ 0.64
CLDN1O95832 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN1O95832 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.08■□□□□ 0.64
CLDN1O95832 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN1O95832 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN1O95832 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN1O95832 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.08■□□□□ 0.64
CLDN1O95832 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN1O95832 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN1O95832 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.07■□□□□ 0.64
CLDN1O95832 AC004812.2-201ENST00000611079 2094 ntBASIC19.07■□□□□ 0.64
CLDN1O95832 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN1O95832 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.07■□□□□ 0.64
CLDN1O95832 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN1O95832 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN1O95832 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CLDN1O95832 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN1O95832 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.07■□□□□ 0.64
CLDN1O95832 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CLDN1O95832 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.07■□□□□ 0.64
CLDN1O95832 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.07■□□□□ 0.64
CLDN1O95832 AP001160.3-201ENST00000601484 763 ntBASIC19.07■□□□□ 0.64
CLDN1O95832 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CLDN1O95832 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CLDN1O95832 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN1O95832 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.07■□□□□ 0.64
CLDN1O95832 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN1O95832 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN1O95832 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.07■□□□□ 0.64
CLDN1O95832 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN1O95832 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CLDN1O95832 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN1O95832 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.06■□□□□ 0.64
CLDN1O95832 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN1O95832 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN1O95832 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.06■□□□□ 0.64
CLDN1O95832 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CLDN1O95832 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CLDN1O95832 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CLDN1O95832 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.06■□□□□ 0.64
CLDN1O95832 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN1O95832 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN1O95832 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN1O95832 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
CLDN1O95832 AC005224.4-201ENST00000583262 1652 ntBASIC19.05■□□□□ 0.64
CLDN1O95832 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CLDN1O95832 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN1O95832 ESRRAP1-201ENST00000400596 1257 ntBASIC19.05■□□□□ 0.64
CLDN1O95832 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.05■□□□□ 0.64
CLDN1O95832 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN1O95832 AC142381.4-202ENST00000563973 229 ntBASIC19.05■□□□□ 0.64
CLDN1O95832 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN1O95832 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.05■□□□□ 0.64
CLDN1O95832 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.05■□□□□ 0.64
CLDN1O95832 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN1O95832 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN1O95832 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN1O95832 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN1O95832 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN1O95832 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CLDN1O95832 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN1O95832 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN1O95832 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN1O95832 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN1O95832 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN1O95832 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN1O95832 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN1O95832 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN1O95832 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CLDN1O95832 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN1O95832 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.04■□□□□ 0.64
CLDN1O95832 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN1O95832 AC010536.3-201ENST00000620306 533 ntBASIC19.04■□□□□ 0.64
CLDN1O95832 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.04■□□□□ 0.64
CLDN1O95832 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.04■□□□□ 0.64
CLDN1O95832 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN1O95832 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN1O95832 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN1O95832 AC012676.1-201ENST00000574705 1949 ntBASIC19.04■□□□□ 0.64
CLDN1O95832 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN1O95832 AC004687.1-201ENST00000579003 1625 ntBASIC19.03■□□□□ 0.64
CLDN1O95832 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN1O95832 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN1O95832 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN1O95832 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CLDN1O95832 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.03■□□□□ 0.64
CLDN1O95832 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms