Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CLDN9O95484 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.7■□□□□ 0.9
CLDN9O95484 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN9O95484 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN9O95484 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CLDN9O95484 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.7■□□□□ 0.9
CLDN9O95484 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN9O95484 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.7■□□□□ 0.9
CLDN9O95484 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN9O95484 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN9O95484 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN9O95484 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN9O95484 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN9O95484 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN9O95484 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
CLDN9O95484 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN9O95484 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.69■□□□□ 0.9
CLDN9O95484 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.69■□□□□ 0.9
CLDN9O95484 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.69■□□□□ 0.9
CLDN9O95484 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.69■□□□□ 0.9
CLDN9O95484 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN9O95484 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.69■□□□□ 0.9
CLDN9O95484 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CLDN9O95484 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.69■□□□□ 0.9
CLDN9O95484 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CLDN9O95484 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN9O95484 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.69■□□□□ 0.9
CLDN9O95484 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.69■□□□□ 0.9
CLDN9O95484 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.68■□□□□ 0.9
CLDN9O95484 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN9O95484 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN9O95484 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN9O95484 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN9O95484 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.68■□□□□ 0.9
CLDN9O95484 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN9O95484 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
CLDN9O95484 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN9O95484 AC126544.1-201ENST00000580842 1059 ntBASIC20.68■□□□□ 0.9
CLDN9O95484 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN9O95484 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN9O95484 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN9O95484 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN9O95484 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN9O95484 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.68■□□□□ 0.9
CLDN9O95484 Z98882.1-201ENST00000622160 2253 ntBASIC20.67■□□□□ 0.9
CLDN9O95484 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN9O95484 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN9O95484 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN9O95484 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CLDN9O95484 AC096631.2-201ENST00000436136 790 ntBASIC20.67■□□□□ 0.9
CLDN9O95484 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.67■□□□□ 0.9
CLDN9O95484 AC133561.4-201ENST00000566112 224 ntBASIC20.67■□□□□ 0.9
CLDN9O95484 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN9O95484 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CLDN9O95484 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CLDN9O95484 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN9O95484 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN9O95484 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.67■□□□□ 0.9
CLDN9O95484 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN9O95484 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.66■□□□□ 0.9
CLDN9O95484 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.66■□□□□ 0.9
CLDN9O95484 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CLDN9O95484 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CLDN9O95484 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.66■□□□□ 0.9
CLDN9O95484 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN9O95484 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CLDN9O95484 PBX2P1-201ENST00000493219 1291 ntBASIC20.66■□□□□ 0.9
CLDN9O95484 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.66■□□□□ 0.9
CLDN9O95484 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.66■□□□□ 0.9
CLDN9O95484 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.66■□□□□ 0.9
CLDN9O95484 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN9O95484 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN9O95484 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN9O95484 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN9O95484 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN9O95484 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN9O95484 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN9O95484 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.65■□□□□ 0.9
CLDN9O95484 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.65■□□□□ 0.9
CLDN9O95484 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN9O95484 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
CLDN9O95484 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.65■□□□□ 0.9
CLDN9O95484 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.65■□□□□ 0.9
CLDN9O95484 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN9O95484 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.65■□□□□ 0.9
CLDN9O95484 AC008764.7-201ENST00000593779 1081 ntBASIC20.65■□□□□ 0.9
CLDN9O95484 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.65■□□□□ 0.9
CLDN9O95484 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN9O95484 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
CLDN9O95484 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLDN9O95484 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLDN9O95484 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.64■□□□□ 0.9
CLDN9O95484 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CLDN9O95484 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CLDN9O95484 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN9O95484 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN9O95484 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.64■□□□□ 0.89
CLDN9O95484 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN9O95484 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN9O95484 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms