Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 AC104187.1-201ENST00000607510 612 ntBASIC22.08■■□□□ 1.13
TSPAN3O60637 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
TSPAN3O60637 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
TSPAN3O60637 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
TSPAN3O60637 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
TSPAN3O60637 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.08■■□□□ 1.12
TSPAN3O60637 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TSPAN3O60637 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TSPAN3O60637 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.07■■□□□ 1.12
TSPAN3O60637 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TSPAN3O60637 KRT19P1-201ENST00000405746 1186 ntBASIC22.07■■□□□ 1.12
TSPAN3O60637 AC016769.1-201ENST00000409132 1010 ntBASIC22.07■■□□□ 1.12
TSPAN3O60637 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.07■■□□□ 1.12
TSPAN3O60637 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.07■■□□□ 1.12
TSPAN3O60637 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
TSPAN3O60637 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TSPAN3O60637 KRT87P-202ENST00000534226 1464 ntBASIC22.07■■□□□ 1.12
TSPAN3O60637 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TSPAN3O60637 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TSPAN3O60637 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.07■■□□□ 1.12
TSPAN3O60637 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TSPAN3O60637 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TSPAN3O60637 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.07■■□□□ 1.12
TSPAN3O60637 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.06■■□□□ 1.12
TSPAN3O60637 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TSPAN3O60637 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TSPAN3O60637 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TSPAN3O60637 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.06■■□□□ 1.12
TSPAN3O60637 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
TSPAN3O60637 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TSPAN3O60637 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TSPAN3O60637 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TSPAN3O60637 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.06■■□□□ 1.12
TSPAN3O60637 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.06■■□□□ 1.12
TSPAN3O60637 AC090192.1-201ENST00000517740 490 ntBASIC22.06■■□□□ 1.12
TSPAN3O60637 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TSPAN3O60637 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.06■■□□□ 1.12
TSPAN3O60637 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.06■■□□□ 1.12
TSPAN3O60637 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.06■■□□□ 1.12
TSPAN3O60637 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TSPAN3O60637 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TSPAN3O60637 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TSPAN3O60637 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TSPAN3O60637 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.06■■□□□ 1.12
TSPAN3O60637 AP006587.3-201ENST00000525742 1516 ntBASIC22.06■■□□□ 1.12
TSPAN3O60637 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
TSPAN3O60637 AC127496.7-201ENST00000625110 1798 ntBASIC22.05■■□□□ 1.12
TSPAN3O60637 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.05■■□□□ 1.12
TSPAN3O60637 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TSPAN3O60637 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TSPAN3O60637 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.05■■□□□ 1.12
TSPAN3O60637 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TSPAN3O60637 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.05■■□□□ 1.12
TSPAN3O60637 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.05■■□□□ 1.12
TSPAN3O60637 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.05■■□□□ 1.12
TSPAN3O60637 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TSPAN3O60637 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TSPAN3O60637 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TSPAN3O60637 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
TSPAN3O60637 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TSPAN3O60637 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TSPAN3O60637 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.04■■□□□ 1.12
TSPAN3O60637 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
TSPAN3O60637 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
TSPAN3O60637 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
TSPAN3O60637 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
TSPAN3O60637 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
TSPAN3O60637 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.04■■□□□ 1.12
TSPAN3O60637 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.03■■□□□ 1.12
TSPAN3O60637 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TSPAN3O60637 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TSPAN3O60637 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.03■■□□□ 1.12
TSPAN3O60637 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TSPAN3O60637 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.03■■□□□ 1.12
TSPAN3O60637 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
TSPAN3O60637 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TSPAN3O60637 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.03■■□□□ 1.12
TSPAN3O60637 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TSPAN3O60637 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.03■■□□□ 1.12
TSPAN3O60637 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.03■■□□□ 1.12
TSPAN3O60637 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TSPAN3O60637 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TSPAN3O60637 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
TSPAN3O60637 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.02■■□□□ 1.12
TSPAN3O60637 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TSPAN3O60637 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.02■■□□□ 1.12
TSPAN3O60637 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
TSPAN3O60637 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.02■■□□□ 1.12
TSPAN3O60637 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.02■■□□□ 1.12
TSPAN3O60637 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.02■■□□□ 1.12
TSPAN3O60637 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.02■■□□□ 1.12
TSPAN3O60637 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TSPAN3O60637 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TSPAN3O60637 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
TSPAN3O60637 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TSPAN3O60637 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.02■■□□□ 1.11
TSPAN3O60637 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.02■■□□□ 1.11
TSPAN3O60637 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
TSPAN3O60637 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
TSPAN3O60637 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms