Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ARHGEF9O43307 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF9O43307 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF9O43307 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ARHGEF9O43307 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ARHGEF9O43307 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF9O43307 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF9O43307 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF9O43307 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF9O43307 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF9O43307 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF9O43307 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF9O43307 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.69■□□□□ 0.74
ARHGEF9O43307 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ARHGEF9O43307 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARHGEF9O43307 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.68■□□□□ 0.74
ARHGEF9O43307 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ARHGEF9O43307 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.68■□□□□ 0.74
ARHGEF9O43307 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.68■□□□□ 0.74
ARHGEF9O43307 AC004687.1-201ENST00000579003 1625 ntBASIC19.68■□□□□ 0.74
ARHGEF9O43307 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ARHGEF9O43307 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.68■□□□□ 0.74
ARHGEF9O43307 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.68■□□□□ 0.74
ARHGEF9O43307 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ARHGEF9O43307 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ARHGEF9O43307 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ARHGEF9O43307 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ARHGEF9O43307 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.67■□□□□ 0.74
ARHGEF9O43307 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.67■□□□□ 0.74
ARHGEF9O43307 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.67■□□□□ 0.74
ARHGEF9O43307 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.67■□□□□ 0.74
ARHGEF9O43307 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.67■□□□□ 0.74
ARHGEF9O43307 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ARHGEF9O43307 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ARHGEF9O43307 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ARHGEF9O43307 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.67■□□□□ 0.74
ARHGEF9O43307 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ARHGEF9O43307 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ARHGEF9O43307 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ARHGEF9O43307 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ARHGEF9O43307 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ARHGEF9O43307 AC080038.3-201ENST00000623346 1952 ntBASIC19.66■□□□□ 0.74
ARHGEF9O43307 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ARHGEF9O43307 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.66■□□□□ 0.74
ARHGEF9O43307 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
ARHGEF9O43307 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ARHGEF9O43307 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ARHGEF9O43307 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.66■□□□□ 0.74
ARHGEF9O43307 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ARHGEF9O43307 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ARHGEF9O43307 AF213884.3-201ENST00000563833 479 ntBASIC19.66■□□□□ 0.74
ARHGEF9O43307 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.66■□□□□ 0.74
ARHGEF9O43307 AL136967.2-201ENST00000623968 743 ntBASIC19.66■□□□□ 0.74
ARHGEF9O43307 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.66■□□□□ 0.74
ARHGEF9O43307 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ARHGEF9O43307 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ARHGEF9O43307 LINC01960-201ENST00000563759 1884 ntBASIC19.66■□□□□ 0.74
ARHGEF9O43307 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ARHGEF9O43307 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.66■□□□□ 0.74
ARHGEF9O43307 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ARHGEF9O43307 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ARHGEF9O43307 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ARHGEF9O43307 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ARHGEF9O43307 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ARHGEF9O43307 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ARHGEF9O43307 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ARHGEF9O43307 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ARHGEF9O43307 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.66■□□□□ 0.74
ARHGEF9O43307 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARHGEF9O43307 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ARHGEF9O43307 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARHGEF9O43307 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.65■□□□□ 0.74
ARHGEF9O43307 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ARHGEF9O43307 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
ARHGEF9O43307 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARHGEF9O43307 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARHGEF9O43307 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARHGEF9O43307 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARHGEF9O43307 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.65■□□□□ 0.74
ARHGEF9O43307 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ARHGEF9O43307 MIR6821-201ENST00000617625 74 ntBASIC19.65■□□□□ 0.74
ARHGEF9O43307 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.65■□□□□ 0.74
ARHGEF9O43307 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ARHGEF9O43307 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARHGEF9O43307 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARHGEF9O43307 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARHGEF9O43307 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARHGEF9O43307 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ARHGEF9O43307 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARHGEF9O43307 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ARHGEF9O43307 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARHGEF9O43307 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ARHGEF9O43307 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARHGEF9O43307 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ARHGEF9O43307 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.64■□□□□ 0.74
ARHGEF9O43307 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
ARHGEF9O43307 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ARHGEF9O43307 AC091305.1-201ENST00000479476 895 ntBASIC19.64■□□□□ 0.73
ARHGEF9O43307 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.64■□□□□ 0.73
ARHGEF9O43307 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms