Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
SRGAP3O43295 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SRGAP3O43295 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC26.66■■□□□ 1.86
SRGAP3O43295 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC26.66■■□□□ 1.86
SRGAP3O43295 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SRGAP3O43295 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
SRGAP3O43295 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC26.66■■□□□ 1.86
SRGAP3O43295 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC26.66■■□□□ 1.86
SRGAP3O43295 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC26.65■■□□□ 1.86
SRGAP3O43295 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
SRGAP3O43295 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC26.65■■□□□ 1.86
SRGAP3O43295 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SRGAP3O43295 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC26.65■■□□□ 1.86
SRGAP3O43295 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SRGAP3O43295 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
SRGAP3O43295 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC26.65■■□□□ 1.86
SRGAP3O43295 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC26.65■■□□□ 1.86
SRGAP3O43295 AL162430.1-201ENST00000480705 870 ntBASIC26.65■■□□□ 1.86
SRGAP3O43295 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
SRGAP3O43295 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SRGAP3O43295 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
SRGAP3O43295 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SRGAP3O43295 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC26.65■■□□□ 1.86
SRGAP3O43295 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SRGAP3O43295 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC26.64■■□□□ 1.86
SRGAP3O43295 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
SRGAP3O43295 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
SRGAP3O43295 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
SRGAP3O43295 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SRGAP3O43295 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC26.64■■□□□ 1.86
SRGAP3O43295 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC26.64■■□□□ 1.86
SRGAP3O43295 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SRGAP3O43295 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC26.64■■□□□ 1.86
SRGAP3O43295 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SRGAP3O43295 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SRGAP3O43295 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SRGAP3O43295 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SRGAP3O43295 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SRGAP3O43295 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SRGAP3O43295 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC26.63■■□□□ 1.85
SRGAP3O43295 AC079140.4-201ENST00000507448 529 ntBASIC26.63■■□□□ 1.85
SRGAP3O43295 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC26.63■■□□□ 1.85
SRGAP3O43295 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
SRGAP3O43295 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SRGAP3O43295 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SRGAP3O43295 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
SRGAP3O43295 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
SRGAP3O43295 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
SRGAP3O43295 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SRGAP3O43295 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SRGAP3O43295 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SRGAP3O43295 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SRGAP3O43295 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC26.61■■□□□ 1.85
SRGAP3O43295 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC26.61■■□□□ 1.85
SRGAP3O43295 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC26.61■■□□□ 1.85
SRGAP3O43295 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC26.61■■□□□ 1.85
SRGAP3O43295 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SRGAP3O43295 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
SRGAP3O43295 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC26.61■■□□□ 1.85
SRGAP3O43295 KRT18P61-201ENST00000585825 1298 ntBASIC26.61■■□□□ 1.85
SRGAP3O43295 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SRGAP3O43295 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
SRGAP3O43295 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SRGAP3O43295 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC26.6■■□□□ 1.85
SRGAP3O43295 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SRGAP3O43295 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC26.6■■□□□ 1.85
SRGAP3O43295 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC26.6■■□□□ 1.85
SRGAP3O43295 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SRGAP3O43295 KRT18P5-201ENST00000436075 1291 ntBASIC26.6■■□□□ 1.85
SRGAP3O43295 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC26.6■■□□□ 1.85
SRGAP3O43295 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC26.6■■□□□ 1.85
SRGAP3O43295 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC26.6■■□□□ 1.85
SRGAP3O43295 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
SRGAP3O43295 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
SRGAP3O43295 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SRGAP3O43295 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SRGAP3O43295 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SRGAP3O43295 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SRGAP3O43295 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SRGAP3O43295 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SRGAP3O43295 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SRGAP3O43295 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SRGAP3O43295 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
SRGAP3O43295 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SRGAP3O43295 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC26.59■■□□□ 1.85
SRGAP3O43295 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC26.59■■□□□ 1.85
SRGAP3O43295 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC26.59■■□□□ 1.85
SRGAP3O43295 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC26.59■■□□□ 1.85
SRGAP3O43295 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SRGAP3O43295 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC26.59■■□□□ 1.85
SRGAP3O43295 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
SRGAP3O43295 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC26.59■■□□□ 1.85
SRGAP3O43295 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC26.59■■□□□ 1.85
SRGAP3O43295 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SRGAP3O43295 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
SRGAP3O43295 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
SRGAP3O43295 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC26.59■■□□□ 1.85
SRGAP3O43295 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
SRGAP3O43295 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SRGAP3O43295 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC26.58■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms