Protein–RNA interactions for Protein: O14994

SYN3, Synapsin-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3O14994 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SYN3O14994 DUX4L16-201ENST00000555130 1264 ntBASIC22.73■■□□□ 1.23
SYN3O14994 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SYN3O14994 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SYN3O14994 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SYN3O14994 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.73■■□□□ 1.23
SYN3O14994 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SYN3O14994 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SYN3O14994 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SYN3O14994 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
SYN3O14994 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SYN3O14994 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.72■■□□□ 1.23
SYN3O14994 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SYN3O14994 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
SYN3O14994 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
SYN3O14994 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
SYN3O14994 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SYN3O14994 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SYN3O14994 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.72■■□□□ 1.23
SYN3O14994 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.72■■□□□ 1.23
SYN3O14994 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
SYN3O14994 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.72■■□□□ 1.23
SYN3O14994 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.72■■□□□ 1.23
SYN3O14994 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.72■■□□□ 1.23
SYN3O14994 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SYN3O14994 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SYN3O14994 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SYN3O14994 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SYN3O14994 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SYN3O14994 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SYN3O14994 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SYN3O14994 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SYN3O14994 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SYN3O14994 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
SYN3O14994 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SYN3O14994 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SYN3O14994 MIR663A-201ENST00000385250 93 ntBASIC22.71■■□□□ 1.23
SYN3O14994 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
SYN3O14994 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.71■■□□□ 1.23
SYN3O14994 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.71■■□□□ 1.23
SYN3O14994 SLC7A5P1-201ENST00000568957 537 ntBASIC22.71■■□□□ 1.23
SYN3O14994 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.71■■□□□ 1.23
SYN3O14994 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.71■■□□□ 1.23
SYN3O14994 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.71■■□□□ 1.23
SYN3O14994 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
SYN3O14994 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SYN3O14994 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.23
SYN3O14994 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
SYN3O14994 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SYN3O14994 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
SYN3O14994 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
SYN3O14994 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.7■■□□□ 1.22
SYN3O14994 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SYN3O14994 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
SYN3O14994 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.7■■□□□ 1.22
SYN3O14994 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SYN3O14994 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
SYN3O14994 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.7■■□□□ 1.22
SYN3O14994 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SYN3O14994 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.69■■□□□ 1.22
SYN3O14994 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.69■■□□□ 1.22
SYN3O14994 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.69■■□□□ 1.22
SYN3O14994 NCF1B-203ENST00000435988 1254 ntBASIC22.69■■□□□ 1.22
SYN3O14994 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SYN3O14994 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
SYN3O14994 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.69■■□□□ 1.22
SYN3O14994 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SYN3O14994 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
SYN3O14994 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
SYN3O14994 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.68■■□□□ 1.22
SYN3O14994 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SYN3O14994 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.68■■□□□ 1.22
SYN3O14994 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.68■■□□□ 1.22
SYN3O14994 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SYN3O14994 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.68■■□□□ 1.22
SYN3O14994 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
SYN3O14994 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
SYN3O14994 AC007322.1-201ENST00000426983 750 ntBASIC22.68■■□□□ 1.22
SYN3O14994 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.68■■□□□ 1.22
SYN3O14994 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SYN3O14994 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.68■■□□□ 1.22
SYN3O14994 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.68■■□□□ 1.22
SYN3O14994 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.68■■□□□ 1.22
SYN3O14994 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
SYN3O14994 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.68■■□□□ 1.22
SYN3O14994 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.68■■□□□ 1.22
SYN3O14994 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.68■■□□□ 1.22
SYN3O14994 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SYN3O14994 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SYN3O14994 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.68■■□□□ 1.22
SYN3O14994 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.67■■□□□ 1.22
SYN3O14994 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.67■■□□□ 1.22
SYN3O14994 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.67■■□□□ 1.22
SYN3O14994 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.67■■□□□ 1.22
SYN3O14994 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SYN3O14994 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SYN3O14994 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SYN3O14994 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.67■■□□□ 1.22
SYN3O14994 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.67■■□□□ 1.22
SYN3O14994 AC104771.1-201ENST00000603335 964 ntBASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms