Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SIRPB1O00241 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SIRPB1O00241 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.06■□□□□ 0.48
SIRPB1O00241 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIRPB1O00241 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.06■□□□□ 0.48
SIRPB1O00241 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.06■□□□□ 0.48
SIRPB1O00241 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SIRPB1O00241 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SIRPB1O00241 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIRPB1O00241 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SIRPB1O00241 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.06■□□□□ 0.48
SIRPB1O00241 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIRPB1O00241 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIRPB1O00241 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIRPB1O00241 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SIRPB1O00241 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
SIRPB1O00241 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SIRPB1O00241 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SIRPB1O00241 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SIRPB1O00241 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SIRPB1O00241 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SIRPB1O00241 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SIRPB1O00241 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.05■□□□□ 0.48
SIRPB1O00241 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.05■□□□□ 0.48
SIRPB1O00241 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.05■□□□□ 0.48
SIRPB1O00241 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.05■□□□□ 0.48
SIRPB1O00241 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SIRPB1O00241 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SIRPB1O00241 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SIRPB1O00241 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SIRPB1O00241 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SIRPB1O00241 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.05■□□□□ 0.48
SIRPB1O00241 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SIRPB1O00241 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIRPB1O00241 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIRPB1O00241 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIRPB1O00241 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIRPB1O00241 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIRPB1O00241 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
SIRPB1O00241 AC026471.6-201ENST00000622954 1905 ntBASIC18.04■□□□□ 0.48
SIRPB1O00241 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SIRPB1O00241 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.04■□□□□ 0.48
SIRPB1O00241 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SIRPB1O00241 BX842568.3-201ENST00000418104 571 ntBASIC18.04■□□□□ 0.48
SIRPB1O00241 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.04■□□□□ 0.48
SIRPB1O00241 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIRPB1O00241 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SIRPB1O00241 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SIRPB1O00241 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
SIRPB1O00241 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SIRPB1O00241 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SIRPB1O00241 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIRPB1O00241 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SIRPB1O00241 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.03■□□□□ 0.48
SIRPB1O00241 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIRPB1O00241 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SIRPB1O00241 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SIRPB1O00241 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIRPB1O00241 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SIRPB1O00241 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIRPB1O00241 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIRPB1O00241 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.03■□□□□ 0.48
SIRPB1O00241 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SIRPB1O00241 PBX2P1-201ENST00000493219 1291 ntBASIC18.03■□□□□ 0.48
SIRPB1O00241 AC126544.1-201ENST00000580842 1059 ntBASIC18.03■□□□□ 0.48
SIRPB1O00241 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.03■□□□□ 0.48
SIRPB1O00241 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIRPB1O00241 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIRPB1O00241 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIRPB1O00241 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.03■□□□□ 0.48
SIRPB1O00241 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIRPB1O00241 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIRPB1O00241 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIRPB1O00241 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SIRPB1O00241 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.03■□□□□ 0.48
SIRPB1O00241 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
SIRPB1O00241 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIRPB1O00241 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
SIRPB1O00241 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.02■□□□□ 0.48
SIRPB1O00241 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.02■□□□□ 0.48
SIRPB1O00241 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
SIRPB1O00241 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIRPB1O00241 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
SIRPB1O00241 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIRPB1O00241 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIRPB1O00241 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIRPB1O00241 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIRPB1O00241 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.02■□□□□ 0.48
SIRPB1O00241 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.48
SIRPB1O00241 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.02■□□□□ 0.48
SIRPB1O00241 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.02■□□□□ 0.48
SIRPB1O00241 AC008764.7-201ENST00000593779 1081 ntBASIC18.02■□□□□ 0.48
SIRPB1O00241 AC233992.3-201ENST00000607491 485 ntBASIC18.02■□□□□ 0.48
SIRPB1O00241 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIRPB1O00241 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SIRPB1O00241 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SIRPB1O00241 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SIRPB1O00241 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SIRPB1O00241 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.01■□□□□ 0.47
SIRPB1O00241 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms