Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.86■■□□□ 1.41
SPDYE4A6NLX3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.86■■□□□ 1.41
SPDYE4A6NLX3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SPDYE4A6NLX3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
SPDYE4A6NLX3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
SPDYE4A6NLX3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.85■■□□□ 1.41
SPDYE4A6NLX3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SPDYE4A6NLX3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC23.85■■□□□ 1.41
SPDYE4A6NLX3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SPDYE4A6NLX3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.85■■□□□ 1.41
SPDYE4A6NLX3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
SPDYE4A6NLX3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
SPDYE4A6NLX3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SPDYE4A6NLX3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SPDYE4A6NLX3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.85■■□□□ 1.41
SPDYE4A6NLX3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SPDYE4A6NLX3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.85■■□□□ 1.41
SPDYE4A6NLX3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SPDYE4A6NLX3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
SPDYE4A6NLX3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SPDYE4A6NLX3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC23.85■■□□□ 1.41
SPDYE4A6NLX3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
SPDYE4A6NLX3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SPDYE4A6NLX3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.85■■□□□ 1.41
SPDYE4A6NLX3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
SPDYE4A6NLX3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SPDYE4A6NLX3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SPDYE4A6NLX3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SPDYE4A6NLX3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
SPDYE4A6NLX3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
SPDYE4A6NLX3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SPDYE4A6NLX3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.84■■□□□ 1.41
SPDYE4A6NLX3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.84■■□□□ 1.41
SPDYE4A6NLX3 AL137784.2-201ENST00000607332 1000 ntBASIC23.84■■□□□ 1.41
SPDYE4A6NLX3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SPDYE4A6NLX3 AL161729.1-201ENST00000604104 1402 ntBASIC23.84■■□□□ 1.41
SPDYE4A6NLX3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SPDYE4A6NLX3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SPDYE4A6NLX3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SPDYE4A6NLX3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.83■■□□□ 1.41
SPDYE4A6NLX3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
SPDYE4A6NLX3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SPDYE4A6NLX3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SPDYE4A6NLX3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SPDYE4A6NLX3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SPDYE4A6NLX3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SPDYE4A6NLX3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SPDYE4A6NLX3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.41
SPDYE4A6NLX3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
SPDYE4A6NLX3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SPDYE4A6NLX3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SPDYE4A6NLX3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SPDYE4A6NLX3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.83■■□□□ 1.4
SPDYE4A6NLX3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SPDYE4A6NLX3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SPDYE4A6NLX3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SPDYE4A6NLX3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SPDYE4A6NLX3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SPDYE4A6NLX3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SPDYE4A6NLX3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SPDYE4A6NLX3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
SPDYE4A6NLX3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SPDYE4A6NLX3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
SPDYE4A6NLX3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SPDYE4A6NLX3 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SPDYE4A6NLX3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.82■■□□□ 1.4
SPDYE4A6NLX3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.82■■□□□ 1.4
SPDYE4A6NLX3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.82■■□□□ 1.4
SPDYE4A6NLX3 HLA-L-211ENST00000482052 1765 ntBASIC23.82■■□□□ 1.4
SPDYE4A6NLX3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC23.82■■□□□ 1.4
SPDYE4A6NLX3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
SPDYE4A6NLX3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.82■■□□□ 1.4
SPDYE4A6NLX3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SPDYE4A6NLX3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.81■■□□□ 1.4
SPDYE4A6NLX3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.81■■□□□ 1.4
SPDYE4A6NLX3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC23.81■■□□□ 1.4
SPDYE4A6NLX3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SPDYE4A6NLX3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SPDYE4A6NLX3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
SPDYE4A6NLX3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SPDYE4A6NLX3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SPDYE4A6NLX3 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SPDYE4A6NLX3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.81■■□□□ 1.4
SPDYE4A6NLX3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
SPDYE4A6NLX3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SPDYE4A6NLX3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.81■■□□□ 1.4
SPDYE4A6NLX3 YBX1P1-201ENST00000445822 960 ntBASIC23.81■■□□□ 1.4
SPDYE4A6NLX3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
SPDYE4A6NLX3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SPDYE4A6NLX3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.81■■□□□ 1.4
SPDYE4A6NLX3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SPDYE4A6NLX3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
SPDYE4A6NLX3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
SPDYE4A6NLX3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
SPDYE4A6NLX3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SPDYE4A6NLX3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SPDYE4A6NLX3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SPDYE4A6NLX3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SPDYE4A6NLX3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SPDYE4A6NLX3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms