Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CLRN2A0PK11 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CLRN2A0PK11 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC25.55■■□□□ 1.68
CLRN2A0PK11 PHB2-213ENST00000546111 858 ntTSL 2 BASIC25.55■■□□□ 1.68
CLRN2A0PK11 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC25.55■■□□□ 1.68
CLRN2A0PK11 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC25.55■■□□□ 1.68
CLRN2A0PK11 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
CLRN2A0PK11 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CLRN2A0PK11 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CLRN2A0PK11 AP006587.3-201ENST00000525742 1516 ntBASIC25.54■■□□□ 1.68
CLRN2A0PK11 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
CLRN2A0PK11 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CLRN2A0PK11 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC25.54■■□□□ 1.68
CLRN2A0PK11 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CLRN2A0PK11 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CLRN2A0PK11 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CLRN2A0PK11 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC25.54■■□□□ 1.68
CLRN2A0PK11 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
CLRN2A0PK11 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC25.54■■□□□ 1.68
CLRN2A0PK11 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CLRN2A0PK11 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
CLRN2A0PK11 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC25.53■■□□□ 1.68
CLRN2A0PK11 MIPEPP3-201ENST00000412105 444 ntBASIC25.53■■□□□ 1.68
CLRN2A0PK11 MARS-234ENST00000630571 216 ntTSL 5 BASIC25.53■■□□□ 1.68
CLRN2A0PK11 MARS-235ENST00000630803 183 ntTSL 3 BASIC25.53■■□□□ 1.68
CLRN2A0PK11 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
CLRN2A0PK11 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CLRN2A0PK11 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
CLRN2A0PK11 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CLRN2A0PK11 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC25.53■■□□□ 1.68
CLRN2A0PK11 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
CLRN2A0PK11 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC25.52■■□□□ 1.68
CLRN2A0PK11 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CLRN2A0PK11 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CLRN2A0PK11 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CLRN2A0PK11 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CLRN2A0PK11 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC25.52■■□□□ 1.68
CLRN2A0PK11 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CLRN2A0PK11 AC093787.1-201ENST00000450396 207 ntBASIC25.52■■□□□ 1.68
CLRN2A0PK11 RNA5SP413-201ENST00000516373 109 ntBASIC25.52■■□□□ 1.68
CLRN2A0PK11 PLLP-204ENST00000569059 665 ntTSL 3 BASIC25.52■■□□□ 1.68
CLRN2A0PK11 MIR4758-201ENST00000577688 71 ntBASIC25.52■■□□□ 1.68
CLRN2A0PK11 AC008687.6-201ENST00000596318 630 ntBASIC25.52■■□□□ 1.68
CLRN2A0PK11 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC25.52■■□□□ 1.68
CLRN2A0PK11 MKRN4P-201ENST00000444706 1521 ntBASIC25.52■■□□□ 1.68
CLRN2A0PK11 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CLRN2A0PK11 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CLRN2A0PK11 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC25.51■■□□□ 1.67
CLRN2A0PK11 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CLRN2A0PK11 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CLRN2A0PK11 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC25.51■■□□□ 1.67
CLRN2A0PK11 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
CLRN2A0PK11 AL034346.1-201ENST00000568244 1277 ntBASIC25.51■■□□□ 1.67
CLRN2A0PK11 SLC7A5P1-201ENST00000568957 537 ntBASIC25.51■■□□□ 1.67
CLRN2A0PK11 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC25.51■■□□□ 1.67
CLRN2A0PK11 AC053503.5-201ENST00000601508 636 ntBASIC25.51■■□□□ 1.67
CLRN2A0PK11 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC25.51■■□□□ 1.67
CLRN2A0PK11 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CLRN2A0PK11 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
CLRN2A0PK11 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CLRN2A0PK11 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CLRN2A0PK11 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
CLRN2A0PK11 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.5■■□□□ 1.67
CLRN2A0PK11 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CLRN2A0PK11 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CLRN2A0PK11 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC25.5■■□□□ 1.67
CLRN2A0PK11 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC25.5■■□□□ 1.67
CLRN2A0PK11 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC25.5■■□□□ 1.67
CLRN2A0PK11 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CLRN2A0PK11 AC016405.3-201ENST00000607710 860 ntBASIC25.5■■□□□ 1.67
CLRN2A0PK11 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC25.5■■□□□ 1.67
CLRN2A0PK11 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CLRN2A0PK11 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
CLRN2A0PK11 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC25.49■■□□□ 1.67
CLRN2A0PK11 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CLRN2A0PK11 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
CLRN2A0PK11 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CLRN2A0PK11 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
CLRN2A0PK11 PPP1R14BP2-201ENST00000426284 444 ntBASIC25.49■■□□□ 1.67
CLRN2A0PK11 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC25.49■■□□□ 1.67
CLRN2A0PK11 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
CLRN2A0PK11 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
CLRN2A0PK11 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC25.49■■□□□ 1.67
CLRN2A0PK11 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
CLRN2A0PK11 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CLRN2A0PK11 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC25.48■■□□□ 1.67
CLRN2A0PK11 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CLRN2A0PK11 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC25.48■■□□□ 1.67
CLRN2A0PK11 POU5F1P3-201ENST00000428824 1078 ntBASIC25.48■■□□□ 1.67
CLRN2A0PK11 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CLRN2A0PK11 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CLRN2A0PK11 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CLRN2A0PK11 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CLRN2A0PK11 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.48■■□□□ 1.67
CLRN2A0PK11 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CLRN2A0PK11 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC25.47■■□□□ 1.67
CLRN2A0PK11 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CLRN2A0PK11 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CLRN2A0PK11 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC25.47■■□□□ 1.67
CLRN2A0PK11 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms