Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 IKBKGP1-201ENST00000612193 1073 ntBASIC19.85■□□□□ 0.77
TRBV11-1A0A0K0K1C0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV11-1A0A0K0K1C0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV11-1A0A0K0K1C0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV11-1A0A0K0K1C0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.85■□□□□ 0.77
TRBV11-1A0A0K0K1C0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV11-1A0A0K0K1C0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV11-1A0A0K0K1C0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.84■□□□□ 0.77
TRBV11-1A0A0K0K1C0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TRBV11-1A0A0K0K1C0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRBV11-1A0A0K0K1C0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV11-1A0A0K0K1C0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV11-1A0A0K0K1C0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV11-1A0A0K0K1C0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV11-1A0A0K0K1C0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV11-1A0A0K0K1C0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.84■□□□□ 0.77
TRBV11-1A0A0K0K1C0 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.84■□□□□ 0.77
TRBV11-1A0A0K0K1C0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV11-1A0A0K0K1C0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV11-1A0A0K0K1C0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.84■□□□□ 0.77
TRBV11-1A0A0K0K1C0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.84■□□□□ 0.77
TRBV11-1A0A0K0K1C0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.84■□□□□ 0.77
TRBV11-1A0A0K0K1C0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV11-1A0A0K0K1C0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.84■□□□□ 0.77
TRBV11-1A0A0K0K1C0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV11-1A0A0K0K1C0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.84■□□□□ 0.77
TRBV11-1A0A0K0K1C0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRBV11-1A0A0K0K1C0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV11-1A0A0K0K1C0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRBV11-1A0A0K0K1C0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
TRBV11-1A0A0K0K1C0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
TRBV11-1A0A0K0K1C0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.83■□□□□ 0.77
TRBV11-1A0A0K0K1C0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.83■□□□□ 0.77
TRBV11-1A0A0K0K1C0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRBV11-1A0A0K0K1C0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.83■□□□□ 0.77
TRBV11-1A0A0K0K1C0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
TRBV11-1A0A0K0K1C0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.83■□□□□ 0.77
TRBV11-1A0A0K0K1C0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.83■□□□□ 0.77
TRBV11-1A0A0K0K1C0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.83■□□□□ 0.77
TRBV11-1A0A0K0K1C0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TRBV11-1A0A0K0K1C0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRBV11-1A0A0K0K1C0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.83■□□□□ 0.76
TRBV11-1A0A0K0K1C0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRBV11-1A0A0K0K1C0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRBV11-1A0A0K0K1C0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV11-1A0A0K0K1C0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV11-1A0A0K0K1C0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV11-1A0A0K0K1C0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.82■□□□□ 0.76
TRBV11-1A0A0K0K1C0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.82■□□□□ 0.76
TRBV11-1A0A0K0K1C0 KRT19P1-201ENST00000405746 1186 ntBASIC19.82■□□□□ 0.76
TRBV11-1A0A0K0K1C0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.82■□□□□ 0.76
TRBV11-1A0A0K0K1C0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV11-1A0A0K0K1C0 AC233723.2-201ENST00000623798 2106 ntBASIC19.82■□□□□ 0.76
TRBV11-1A0A0K0K1C0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
TRBV11-1A0A0K0K1C0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV11-1A0A0K0K1C0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.82■□□□□ 0.76
TRBV11-1A0A0K0K1C0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV11-1A0A0K0K1C0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV11-1A0A0K0K1C0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.81■□□□□ 0.76
TRBV11-1A0A0K0K1C0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV11-1A0A0K0K1C0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.81■□□□□ 0.76
TRBV11-1A0A0K0K1C0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV11-1A0A0K0K1C0 AC137761.2-201ENST00000561729 223 ntBASIC19.81■□□□□ 0.76
TRBV11-1A0A0K0K1C0 AC145350.3-201ENST00000569033 163 ntBASIC19.81■□□□□ 0.76
TRBV11-1A0A0K0K1C0 AL137784.2-201ENST00000607332 1000 ntBASIC19.81■□□□□ 0.76
TRBV11-1A0A0K0K1C0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV11-1A0A0K0K1C0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV11-1A0A0K0K1C0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.81■□□□□ 0.76
TRBV11-1A0A0K0K1C0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.81■□□□□ 0.76
TRBV11-1A0A0K0K1C0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRBV11-1A0A0K0K1C0 AC092053.2-201ENST00000640557 1818 ntBASIC19.81■□□□□ 0.76
TRBV11-1A0A0K0K1C0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV11-1A0A0K0K1C0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV11-1A0A0K0K1C0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV11-1A0A0K0K1C0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV11-1A0A0K0K1C0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV11-1A0A0K0K1C0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV11-1A0A0K0K1C0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV11-1A0A0K0K1C0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.8■□□□□ 0.76
TRBV11-1A0A0K0K1C0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.8■□□□□ 0.76
TRBV11-1A0A0K0K1C0 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.8■□□□□ 0.76
TRBV11-1A0A0K0K1C0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.8■□□□□ 0.76
TRBV11-1A0A0K0K1C0 AC104187.1-201ENST00000607510 612 ntBASIC19.8■□□□□ 0.76
TRBV11-1A0A0K0K1C0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV11-1A0A0K0K1C0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV11-1A0A0K0K1C0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.8■□□□□ 0.76
TRBV11-1A0A0K0K1C0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV11-1A0A0K0K1C0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV11-1A0A0K0K1C0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV11-1A0A0K0K1C0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.79■□□□□ 0.76
TRBV11-1A0A0K0K1C0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV11-1A0A0K0K1C0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV11-1A0A0K0K1C0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.79■□□□□ 0.76
TRBV11-1A0A0K0K1C0 AC016769.1-201ENST00000409132 1010 ntBASIC19.79■□□□□ 0.76
TRBV11-1A0A0K0K1C0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV11-1A0A0K0K1C0 AC092437.1-201ENST00000624794 1048 ntBASIC19.79■□□□□ 0.76
TRBV11-1A0A0K0K1C0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TRBV11-1A0A0K0K1C0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV11-1A0A0K0K1C0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV11-1A0A0K0K1C0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms