Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV4-1A0A0J9YWV2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.63■□□□□ 0.73
TRBV4-1A0A0J9YWV2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV4-1A0A0J9YWV2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV4-1A0A0J9YWV2 KRT16P3-201ENST00000439127 1283 ntBASIC19.63■□□□□ 0.73
TRBV4-1A0A0J9YWV2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.63■□□□□ 0.73
TRBV4-1A0A0J9YWV2 MIR3181-201ENST00000578512 73 ntBASIC19.63■□□□□ 0.73
TRBV4-1A0A0J9YWV2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV4-1A0A0J9YWV2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV4-1A0A0J9YWV2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV4-1A0A0J9YWV2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.62■□□□□ 0.73
TRBV4-1A0A0J9YWV2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV4-1A0A0J9YWV2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV4-1A0A0J9YWV2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.62■□□□□ 0.73
TRBV4-1A0A0J9YWV2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.62■□□□□ 0.73
TRBV4-1A0A0J9YWV2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.62■□□□□ 0.73
TRBV4-1A0A0J9YWV2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV4-1A0A0J9YWV2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV4-1A0A0J9YWV2 AL157384.1-201ENST00000445995 2473 ntBASIC19.62■□□□□ 0.73
TRBV4-1A0A0J9YWV2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
TRBV4-1A0A0J9YWV2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV4-1A0A0J9YWV2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV4-1A0A0J9YWV2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV4-1A0A0J9YWV2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.61■□□□□ 0.73
TRBV4-1A0A0J9YWV2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV4-1A0A0J9YWV2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV4-1A0A0J9YWV2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV4-1A0A0J9YWV2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.61■□□□□ 0.73
TRBV4-1A0A0J9YWV2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV4-1A0A0J9YWV2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV4-1A0A0J9YWV2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TRBV4-1A0A0J9YWV2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV4-1A0A0J9YWV2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV4-1A0A0J9YWV2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV4-1A0A0J9YWV2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRBV4-1A0A0J9YWV2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV4-1A0A0J9YWV2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TRBV4-1A0A0J9YWV2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.6■□□□□ 0.73
TRBV4-1A0A0J9YWV2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV4-1A0A0J9YWV2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV4-1A0A0J9YWV2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TRBV4-1A0A0J9YWV2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV4-1A0A0J9YWV2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV4-1A0A0J9YWV2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV4-1A0A0J9YWV2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV4-1A0A0J9YWV2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.6■□□□□ 0.73
TRBV4-1A0A0J9YWV2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.6■□□□□ 0.73
TRBV4-1A0A0J9YWV2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.6■□□□□ 0.73
TRBV4-1A0A0J9YWV2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.6■□□□□ 0.73
TRBV4-1A0A0J9YWV2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV4-1A0A0J9YWV2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TRBV4-1A0A0J9YWV2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV4-1A0A0J9YWV2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.59■□□□□ 0.73
TRBV4-1A0A0J9YWV2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TRBV4-1A0A0J9YWV2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV4-1A0A0J9YWV2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV4-1A0A0J9YWV2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
TRBV4-1A0A0J9YWV2 OR2I1P-207ENST00000453522 948 ntBASIC19.59■□□□□ 0.73
TRBV4-1A0A0J9YWV2 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.59■□□□□ 0.73
TRBV4-1A0A0J9YWV2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV4-1A0A0J9YWV2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.59■□□□□ 0.73
TRBV4-1A0A0J9YWV2 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.59■□□□□ 0.73
TRBV4-1A0A0J9YWV2 AC068587.7-201ENST00000641602 218 ntBASIC19.59■□□□□ 0.73
TRBV4-1A0A0J9YWV2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV4-1A0A0J9YWV2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.59■□□□□ 0.73
TRBV4-1A0A0J9YWV2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRBV4-1A0A0J9YWV2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.58■□□□□ 0.73
TRBV4-1A0A0J9YWV2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.58■□□□□ 0.73
TRBV4-1A0A0J9YWV2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.58■□□□□ 0.73
TRBV4-1A0A0J9YWV2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRBV4-1A0A0J9YWV2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.58■□□□□ 0.73
TRBV4-1A0A0J9YWV2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.58■□□□□ 0.73
TRBV4-1A0A0J9YWV2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV4-1A0A0J9YWV2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.58■□□□□ 0.72
TRBV4-1A0A0J9YWV2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.58■□□□□ 0.72
TRBV4-1A0A0J9YWV2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV4-1A0A0J9YWV2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV4-1A0A0J9YWV2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
TRBV4-1A0A0J9YWV2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
TRBV4-1A0A0J9YWV2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV4-1A0A0J9YWV2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.58■□□□□ 0.72
TRBV4-1A0A0J9YWV2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV4-1A0A0J9YWV2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV4-1A0A0J9YWV2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV4-1A0A0J9YWV2 AC010525.1-201ENST00000585559 441 ntBASIC19.57■□□□□ 0.72
TRBV4-1A0A0J9YWV2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TRBV4-1A0A0J9YWV2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV4-1A0A0J9YWV2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.57■□□□□ 0.72
TRBV4-1A0A0J9YWV2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV4-1A0A0J9YWV2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV4-1A0A0J9YWV2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV4-1A0A0J9YWV2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.56■□□□□ 0.72
TRBV4-1A0A0J9YWV2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV4-1A0A0J9YWV2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV4-1A0A0J9YWV2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.56■□□□□ 0.72
TRBV4-1A0A0J9YWV2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV4-1A0A0J9YWV2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.56■□□□□ 0.72
TRBV4-1A0A0J9YWV2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.56■□□□□ 0.72
TRBV4-1A0A0J9YWV2 AL356740.2-201ENST00000601559 647 ntBASIC19.56■□□□□ 0.72
TRBV4-1A0A0J9YWV2 AC087239.1-201ENST00000622671 572 ntBASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms