Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV25-1A0A075B6N4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRBV25-1A0A075B6N4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV25-1A0A075B6N4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV25-1A0A075B6N4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV25-1A0A075B6N4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV25-1A0A075B6N4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV25-1A0A075B6N4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV25-1A0A075B6N4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV25-1A0A075B6N4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC15.35■□□□□ 0.05
TRBV25-1A0A075B6N4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
TRBV25-1A0A075B6N4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV25-1A0A075B6N4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV25-1A0A075B6N4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV25-1A0A075B6N4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV25-1A0A075B6N4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRBV25-1A0A075B6N4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC15.35■□□□□ 0.05
TRBV25-1A0A075B6N4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
TRBV25-1A0A075B6N4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TRBV25-1A0A075B6N4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV25-1A0A075B6N4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV25-1A0A075B6N4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
TRBV25-1A0A075B6N4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV25-1A0A075B6N4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV25-1A0A075B6N4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV25-1A0A075B6N4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRBV25-1A0A075B6N4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC15.34■□□□□ 0.05
TRBV25-1A0A075B6N4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV25-1A0A075B6N4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRBV25-1A0A075B6N4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.34■□□□□ 0.05
TRBV25-1A0A075B6N4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV25-1A0A075B6N4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV25-1A0A075B6N4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV25-1A0A075B6N4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRBV25-1A0A075B6N4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV25-1A0A075B6N4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
TRBV25-1A0A075B6N4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC15.34■□□□□ 0.05
TRBV25-1A0A075B6N4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC15.34■□□□□ 0.05
TRBV25-1A0A075B6N4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC15.34■□□□□ 0.05
TRBV25-1A0A075B6N4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV25-1A0A075B6N4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV25-1A0A075B6N4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
TRBV25-1A0A075B6N4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
TRBV25-1A0A075B6N4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV25-1A0A075B6N4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
TRBV25-1A0A075B6N4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV25-1A0A075B6N4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
TRBV25-1A0A075B6N4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRBV25-1A0A075B6N4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
TRBV25-1A0A075B6N4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRBV25-1A0A075B6N4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV25-1A0A075B6N4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRBV25-1A0A075B6N4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV25-1A0A075B6N4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV25-1A0A075B6N4 DUX4L4-201ENST00000566884 1269 ntBASIC15.33■□□□□ 0.04
TRBV25-1A0A075B6N4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC15.33■□□□□ 0.04
TRBV25-1A0A075B6N4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV25-1A0A075B6N4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV25-1A0A075B6N4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV25-1A0A075B6N4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV25-1A0A075B6N4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV25-1A0A075B6N4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TRBV25-1A0A075B6N4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV25-1A0A075B6N4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV25-1A0A075B6N4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
TRBV25-1A0A075B6N4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV25-1A0A075B6N4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV25-1A0A075B6N4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV25-1A0A075B6N4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV25-1A0A075B6N4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV25-1A0A075B6N4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBV25-1A0A075B6N4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
TRBV25-1A0A075B6N4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBV25-1A0A075B6N4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV25-1A0A075B6N4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBV25-1A0A075B6N4 MIR4787-201ENST00000607364 84 ntBASIC15.32■□□□□ 0.04
TRBV25-1A0A075B6N4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRBV25-1A0A075B6N4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV25-1A0A075B6N4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV25-1A0A075B6N4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV25-1A0A075B6N4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV25-1A0A075B6N4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV25-1A0A075B6N4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV25-1A0A075B6N4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV25-1A0A075B6N4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRBV25-1A0A075B6N4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV25-1A0A075B6N4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV25-1A0A075B6N4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV25-1A0A075B6N4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC15.31■□□□□ 0.04
TRBV25-1A0A075B6N4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC15.31■□□□□ 0.04
TRBV25-1A0A075B6N4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV25-1A0A075B6N4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV25-1A0A075B6N4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRBV25-1A0A075B6N4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC15.31■□□□□ 0.04
TRBV25-1A0A075B6N4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV25-1A0A075B6N4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV25-1A0A075B6N4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV25-1A0A075B6N4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV25-1A0A075B6N4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV25-1A0A075B6N4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms