Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 ALOXE3-201ENST00000318227 3053 ntTSL 2 BASIC12.33□□□□□ -0.44
MTHFRP42898 ACTN2-201ENST00000366578 4863 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
MTHFRP42898 FAM213A-201ENST00000372181 2058 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
MTHFRP42898 PSAP-201ENST00000394934 2830 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
MTHFRP42898 ATP6AP1-210ENST00000619046 2823 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
MTHFRP42898 NLRP2-208ENST00000448584 3573 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
MTHFRP42898 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
MTHFRP42898 SOCS6-201ENST00000397942 5848 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MTHFRP42898 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
MTHFRP42898 GNG7-201ENST00000382159 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MTHFRP42898 MARCH5-201ENST00000358935 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MTHFRP42898 TMEM63B-201ENST00000259746 3318 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
MTHFRP42898 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MTHFRP42898 ZNF274-201ENST00000326804 2447 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
MTHFRP42898 AL606534.6-201ENST00000611420 1838 ntBASIC12.32□□□□□ -0.44
MTHFRP42898 MASP1-204ENST00000392470 1673 ntTSL 2 BASIC12.32□□□□□ -0.44
MTHFRP42898 TRIM51CP-201ENST00000505076 1357 ntBASIC12.32□□□□□ -0.44
MTHFRP42898 TJP2-209ENST00000539225 3838 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
MTHFRP42898 TESK2-202ENST00000372086 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MTHFRP42898 AC017083.4-201ENST00000406334 2306 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
MTHFRP42898 GOLGA1-202ENST00000373555 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MTHFRP42898 ENC1-206ENST00000537006 2024 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
MTHFRP42898 CHST9-201ENST00000580774 2033 ntTSL 3 BASIC12.32□□□□□ -0.44
MTHFRP42898 CALM1-201ENST00000356978 4242 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
MTHFRP42898 ASPH-208ENST00000517856 6337 ntTSL 2 BASIC12.32□□□□□ -0.44
MTHFRP42898 MYLPF-201ENST00000322861 682 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MTHFRP42898 LINC01556-201ENST00000377186 466 ntTSL 2 BASIC12.32□□□□□ -0.44
MTHFRP42898 RNA5SP244-201ENST00000390936 112 ntBASIC12.32□□□□□ -0.44
MTHFRP42898 TPD52L1-204ENST00000392482 1165 ntTSL 2 BASIC12.32□□□□□ -0.44
MTHFRP42898 RN7SKP262-201ENST00000411018 283 ntBASIC12.32□□□□□ -0.44
MTHFRP42898 SUPT4H1P1-201ENST00000423067 340 ntBASIC12.32□□□□□ -0.44
MTHFRP42898 ACTG1P12-201ENST00000423183 1166 ntBASIC12.32□□□□□ -0.44
MTHFRP42898 AL133163.1-201ENST00000459899 949 ntBASIC12.32□□□□□ -0.44
MTHFRP42898 TMED5-204ENST00000479918 1296 ntTSL 3 BASIC12.32□□□□□ -0.44
MTHFRP42898 SYNPR-AS1-201ENST00000488201 558 ntTSL 5 BASIC12.32□□□□□ -0.44
MTHFRP42898 GUSBP8-201ENST00000502652 679 ntBASIC12.32□□□□□ -0.44
MTHFRP42898 LINC01950-201ENST00000505997 602 ntTSL 3 BASIC12.32□□□□□ -0.44
MTHFRP42898 AC093827.3-201ENST00000514631 1110 ntBASIC12.32□□□□□ -0.44
MTHFRP42898 UTP23-203ENST00000517820 796 ntTSL 3 BASIC12.32□□□□□ -0.44
MTHFRP42898 AC099524.1-205ENST00000562180 674 ntTSL 5 BASIC12.32□□□□□ -0.44
MTHFRP42898 AC093802.2-201ENST00000567853 583 ntBASIC12.32□□□□□ -0.44
MTHFRP42898 CISTR-201ENST00000570015 581 ntTSL 2 BASIC12.32□□□□□ -0.44
MTHFRP42898 RMRP-201ENST00000602361 268 ntBASIC12.32□□□□□ -0.44
MTHFRP42898 AC087163.3-201ENST00000624345 700 ntBASIC12.32□□□□□ -0.44
MTHFRP42898 AP000711.1-201ENST00000624964 917 ntBASIC12.32□□□□□ -0.44
MTHFRP42898 STAT6-203ENST00000537215 2886 ntTSL 2 BASIC12.32□□□□□ -0.44
MTHFRP42898 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
MTHFRP42898 WDR24-202ENST00000293883 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MTHFRP42898 PIGG-203ENST00000453061 3218 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MTHFRP42898 IGSF1-202ENST00000370900 1786 ntTSL 2 BASIC12.32□□□□□ -0.44
MTHFRP42898 EPB41L1-212ENST00000441639 5967 ntTSL 5 BASIC12.32□□□□□ -0.44
MTHFRP42898 PCDHGA2-202ENST00000528330 4543 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
MTHFRP42898 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MTHFRP42898 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC12.32□□□□□ -0.44
MTHFRP42898 FOSB-204ENST00000585836 3550 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
MTHFRP42898 TTN-AS1-204ENST00000431259 1472 ntTSL 5 BASIC12.32□□□□□ -0.44
MTHFRP42898 CSAD-201ENST00000267085 2645 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
MTHFRP42898 RASGEF1A-203ENST00000395809 4104 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
MTHFRP42898 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
MTHFRP42898 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
MTHFRP42898 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
MTHFRP42898 KRI1-201ENST00000312962 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MTHFRP42898 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC12.32□□□□□ -0.44
MTHFRP42898 AC091948.1-201ENST00000501695 2033 ntTSL 2 BASIC12.32□□□□□ -0.44
MTHFRP42898 ZNF814-215ENST00000614383 2006 ntTSL 5 BASIC12.32□□□□□ -0.44
MTHFRP42898 NBPF3-203ENST00000342104 3704 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
MTHFRP42898 ST3GAL6-202ENST00000394162 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
MTHFRP42898 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
MTHFRP42898 DMRT1-203ENST00000569227 1385 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
MTHFRP42898 RPH3A-202ENST00000415485 4452 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
MTHFRP42898 AL008628.1-201ENST00000564198 5187 ntBASIC12.31□□□□□ -0.44
MTHFRP42898 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
MTHFRP42898 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
MTHFRP42898 MBP-207ENST00000397865 2127 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
MTHFRP42898 ENO1-201ENST00000234590 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
MTHFRP42898 PTAR1-201ENST00000340434 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
MTHFRP42898 PALM2-204ENST00000483909 1418 ntTSL 2 BASIC12.31□□□□□ -0.44
MTHFRP42898 RANGAP1-201ENST00000356244 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
MTHFRP42898 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
MTHFRP42898 OR4X1-201ENST00000320048 918 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
MTHFRP42898 KRTAP4-5-201ENST00000343246 879 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
MTHFRP42898 MLIP-202ENST00000370876 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
MTHFRP42898 MIR1273A-201ENST00000408826 103 ntBASIC12.31□□□□□ -0.44
MTHFRP42898 HOTAIRM1-202ENST00000428939 889 ntTSL 2 BASIC12.31□□□□□ -0.44
MTHFRP42898 LINC00106-202ENST00000434938 356 ntTSL 5 BASIC12.31□□□□□ -0.44
MTHFRP42898 AC006965.1-201ENST00000445747 959 ntBASIC12.31□□□□□ -0.44
MTHFRP42898 AC005041.2-201ENST00000448783 982 ntBASIC12.31□□□□□ -0.44
MTHFRP42898 RBMX2P3-201ENST00000450122 957 ntBASIC12.31□□□□□ -0.44
MTHFRP42898 OR2A9P-203ENST00000484189 933 ntBASIC12.31□□□□□ -0.44
MTHFRP42898 OR2A20P-202ENST00000496731 933 ntBASIC12.31□□□□□ -0.44
MTHFRP42898 LINC01099-201ENST00000507011 512 ntTSL 5 BASIC12.31□□□□□ -0.44
MTHFRP42898 CR545473.1-201ENST00000511554 277 ntBASIC12.31□□□□□ -0.44
MTHFRP42898 LINC01099-202ENST00000512527 578 ntTSL 2 BASIC12.31□□□□□ -0.44
MTHFRP42898 LINC02107-201ENST00000513039 462 ntTSL 3 BASIC12.31□□□□□ -0.44
MTHFRP42898 AC233992.1-201ENST00000525023 444 ntTSL 2 BASIC12.31□□□□□ -0.44
MTHFRP42898 AP003063.1-202ENST00000529238 520 ntTSL 3 BASIC12.31□□□□□ -0.44
MTHFRP42898 AC126177.1-202ENST00000548419 973 ntBASIC12.31□□□□□ -0.44
MTHFRP42898 AC012555.1-201ENST00000551650 674 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
MTHFRP42898 MESTP2-201ENST00000559787 889 ntBASIC12.31□□□□□ -0.44
MTHFRP42898 AC083801.2-201ENST00000565024 1180 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms