Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AL139353.3-201ENST00000635085 411 ntBASIC12.47□□□□□ -0.41
LMO3Q8TAP4 TRAK1-206ENST00000449246 3260 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 CHAMP1-201ENST00000361283 3795 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 ACVRL1-206ENST00000550683 4121 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 ZNF625-203ENST00000455799 1678 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 RBM12B-208ENST00000627241 2646 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 PTPN2-201ENST00000309660 3467 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 OR10H1-202ENST00000641419 4376 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 AC008543.5-201ENST00000589227 2515 ntBASIC12.47□□□□□ -0.41
LMO3Q8TAP4 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 SERPINA3-201ENST00000393078 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 TCEA3-203ENST00000450454 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 TP53TG3E-202ENST00000623491 2026 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 FBLN5-201ENST00000267620 2423 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 PTAFR-201ENST00000305392 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 LILRB1-208ENST00000427581 2751 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
LMO3Q8TAP4 ZNF433-203ENST00000419886 2322 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 RFPL2-201ENST00000248980 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 RFPL2-202ENST00000248983 1474 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 ATP2A1-202ENST00000395503 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 DNMBP-201ENST00000324109 6400 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 ARMCX2-203ENST00000356824 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 TRAFD1-202ENST00000412615 2697 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 AC022748.2-203ENST00000564933 1432 ntBASIC12.46□□□□□ -0.41
LMO3Q8TAP4 PAX6-243ENST00000638903 2620 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 ERC2-IT1-201ENST00000629461 2177 ntBASIC12.46□□□□□ -0.41
LMO3Q8TAP4 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 AL132639.2-201ENST00000605298 1359 ntBASIC12.46□□□□□ -0.41
LMO3Q8TAP4 ATAT1-203ENST00000329992 2119 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 ZWILCH-202ENST00000446801 3256 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 STAT6-205ENST00000543873 3119 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 DLGAP4-213ENST00000489701 2396 ntTSL 2 BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 RPL10A-201ENST00000322203 716 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 AGK-201ENST00000355413 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 TP53-202ENST00000359597 1152 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 Z83851.1-201ENST00000420096 545 ntTSL 4 BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 AL162595.1-201ENST00000429227 868 ntTSL 5 BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 AC016894.1-201ENST00000444364 311 ntBASIC12.46□□□□□ -0.41
LMO3Q8TAP4 AC096536.2-201ENST00000450503 343 ntTSL 2 BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 EEF1GP1-201ENST00000457231 1299 ntBASIC12.46□□□□□ -0.41
LMO3Q8TAP4 AC022483.2-201ENST00000461464 555 ntBASIC12.46□□□□□ -0.41
LMO3Q8TAP4 CMSS1-205ENST00000489081 1056 ntTSL 2 BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 AC091893.1-201ENST00000503772 399 ntBASIC12.46□□□□□ -0.41
LMO3Q8TAP4 LINC01950-201ENST00000505997 602 ntTSL 3 BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 AC233724.7-201ENST00000511476 253 ntBASIC12.46□□□□□ -0.41
LMO3Q8TAP4 EEF1DP8-201ENST00000534760 536 ntBASIC12.46□□□□□ -0.41
LMO3Q8TAP4 TPST2P1-201ENST00000564073 1102 ntBASIC12.46□□□□□ -0.41
LMO3Q8TAP4 AC127496.2-201ENST00000576859 368 ntTSL 3 BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 NAA60-236ENST00000577013 575 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 PPY-202ENST00000587006 431 ntTSL 3 BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 EIF3K-213ENST00000593149 760 ntTSL 2 BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 AC006272.1-201ENST00000596964 552 ntTSL 4 BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 AC241644.3-202ENST00000622634 535 ntTSL 5 BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 5_8S_rRNA.4-201ENST00000636054 151 ntBASIC12.46□□□□□ -0.41
LMO3Q8TAP4 AL590556.2-201ENST00000637118 1162 ntTSL 5 BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 IMPDH2-201ENST00000326739 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 RIOX2-203ENST00000394198 2341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 ERBB2-218ENST00000584450 3730 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LMO3Q8TAP4 PNMA6F-201ENST00000436629 3348 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
LMO3Q8TAP4 DIS3-205ENST00000545453 3651 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LMO3Q8TAP4 ZNF793-209ENST00000589319 1915 ntTSL 5 BASIC12.46□□□□□ -0.42
LMO3Q8TAP4 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
LMO3Q8TAP4 VWFP1-201ENST00000457911 2907 ntBASIC12.46□□□□□ -0.42
LMO3Q8TAP4 SLC13A3-211ENST00000495082 1887 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LMO3Q8TAP4 LY6G5B-208ENST00000409525 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
LMO3Q8TAP4 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LMO3Q8TAP4 ALK-207ENST00000642122 2513 ntBASIC12.46□□□□□ -0.42
LMO3Q8TAP4 LINC01238-203ENST00000429456 2170 ntTSL 2 BASIC12.46□□□□□ -0.42
LMO3Q8TAP4 GABPB1-203ENST00000380877 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LMO3Q8TAP4 C9orf3-203ENST00000375315 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LMO3Q8TAP4 PPARGC1B-204ENST00000403750 3146 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
LMO3Q8TAP4 TUBD1-203ENST00000346141 1490 ntTSL 2 BASIC12.46□□□□□ -0.42
LMO3Q8TAP4 SCARB2-202ENST00000452464 1495 ntTSL 2 BASIC12.46□□□□□ -0.42
LMO3Q8TAP4 CUL1-203ENST00000602748 3054 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
LMO3Q8TAP4 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LMO3Q8TAP4 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LMO3Q8TAP4 PSMB2-201ENST00000373237 2701 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LMO3Q8TAP4 MICU1-201ENST00000361114 2383 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LMO3Q8TAP4 ARHGAP6-201ENST00000303025 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LMO3Q8TAP4 SRRT-215ENST00000614484 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LMO3Q8TAP4 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LMO3Q8TAP4 LDAH-202ENST00000381090 2045 ntTSL 5 BASIC12.45□□□□□ -0.42
LMO3Q8TAP4 ZNF195-215ENST00000526601 2008 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
LMO3Q8TAP4 ITGAM-201ENST00000287497 3595 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
LMO3Q8TAP4 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LMO3Q8TAP4 CPA5-208ENST00000485477 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms